Input parameters:

  Query = ENSDARP00000103194 (Len=1133)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000103194, Len=1133):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MRRAARLRFLDWREHKATMGHTSLEKIIALQKKTAHIRNLCILAHVDHGKTTLADCLVASNGIISSRLAGKLRYLDSRED 80  
WD40-rpts                                                                                      

Query       81 EQIRGITMKSSAISLHFATGGVEFLINLIDSPGHVDFSSEVSTAVRLCDGAIVVVDAVEGVCPQTQVVLRQAWLENIRPV 160 
WD40-rpts             (______________________WD 1_____________________)                        

Query      161 LVINKIDRLIAELKLTSQEAYVHLQKILEQVNAVTGTLFTSKVLEERAEKDAGSQSSFTENESGDHVYDWSAGLEETDDS 240 
WD40-rpts                                                                                      

Query      241 DLYFSPDRGNVVFASAIDGWGFSIHQFAEMYSQKMGIRSSVLLKTLWGDFYLNAKAKKIMKGAQSKGKKPLFVQFILDNI 320 
WD40-rpts                                                                                      

Query      321 WSMYDAVVTRRDKEKVEKMMTSLGLKVMSRDLRHSDPKVLLSAICSQWLPLSQAVLSMVCEKLPSPAEISAERVEKLMSV 400 
WD40-rpts                                                                                      

Query      401 GARRFDSLPDKTQELKKAFLDCSADETAPVIVFVSKMFAVDSKALPQNKQRPLTHEEISQRRELARQRHAEKQAANQSAE 480 
WD40-rpts                                                                                      

Query      481 SLASGDAGGDSIPAPAAAGVTDALCAQTEALSVKTTVEEENKEHFVAFARVYSGVVRKGQKVFVLGPKYDPSLALRALPE 560 
WD40-rpts                                                                                      

Query      561 GCSVSDVLPSIPHMSYCTVDSLYLLMGRELEELDEVPSGNVLGIGGLEDVILKSATISTSPACPPFTPLNFEATPIVRVA 640 
WD40-rpts                                                                                      

Query      641 VEPKHPSEMPKLVRGMKLLNQADPCAEVLIQETGEHVLVTAGEVHLQRCLDDLRERFAKIEISSSKPIIPFRETVVRPPR 720 
WD40-rpts                                                                                      

Query      721 VDMVNEDLGKQQKVAVIHQVKEEQSKNPECVQVDSSGLVSLTTPNKMATVGVRAIPLPEQVTCLLEDNVELIRTMEQFNL 800 
WD40-rpts                                                                                      

Query      801 SVREGKTLDISQKILDNIQDFKVKLESHLQGHKWRNAVDHIWAFGPRRCGPNILLNSIEGYRRPSVWQCLETEKTESSAL 880 
WD40-rpts                                                                                      

Query      881 RDFDNSIASGFQLATLAGPMCEEPLMGVCFSVESWDMKISTPVAQQDSVDEGSQPAELNNEHSEVSPVSSSRSRSKAEAA 960 
WD40-rpts                                                                                      

Query      961 GSSVDCYGPFSGQLIAAVKEACRYAFQAKPQRLMAAMYTCEIMATAEVLGRVYAVLSKREGRVLQEEMKEGTDMFIIKAV 1040
WD40-rpts                                                                                      

Query     1041 LPVAESFGFADEIRKRTSGLASPQLIFSHWEVIGSDPFWVPTTEEEYLHFGEKADSTNQALKYMNAVRKRKGLYVEEKIV 1120
WD40-rpts                                                                                      

Query     1121 EHAEKQRTLGKNK 1133
WD40-rpts                   

1 WD40-repeats found in QUERY=ENSDARP00000103194 (Len=1133):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  3    88-136      3.16  245.01  0.03064       27.5%     24.55

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   88-136    MKSSAISLHFATGGVEFLINLIDSPGHVDFSSEVSTAVRLCDGAIVVVD

   WD40 Template    TGECLRTLSGHTSGVTSVSFSPDGKRLVSG---------SEDGTIKVWD