Input parameters:

  Query = ENSDARP00000103150 (Len=500)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000103150, Len=500):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MTAQSCILIKGGKVVNEDFSVMADVYIEDGVISGVGTDLQVAAGTRVIDATHKLVLPGGIDSHTHMELSFMGTTTADDFQ 80  
WD40-rpts                                                                                      

Query       81 TGTQAAVAGGTTMILDFVIAQKGCSLLEAYERWRRTADPKVCCDYSLHMAVTWWDDTVKKEMETLVSEKGINSFKMFMAY 160 
WD40-rpts                                                                                      

Query      161 KDLYMLQDLELYAVFSTCKEIGAIAQVHAENGDLIAEGAKRMLSLGITGPEGHEMCRPEEVEAEATQRAITIAHATNCPL 240 
WD40-rpts                                                                                      

Query      241 YVVHVMSKSAAKVVANARRNGRLVFGEPIAAGLGTDGTHYWHENWAHAAGFVMGPPLRPDPSTPGYLMDLLANDDLSVTG 320 
WD40-rpts                                                                              (_______

Query      321 TDNCTFSVCQKALGKDDFTKIPNGVNGVEDRMSVIWEKGVHSGKMDENRFVAVTSTNAAKIFNLYPRKGRIAKGSDADLV 400 
WD40-rpts      ____________________________________WD 1________________________________________

Query      401 IWDPKASRVISAKTHHQAVDYNIFEGMLCHGVPVVTISRGKVVYENGKLFTKPGEGRYIPRKPFAEFVYKRINQREKVGT 480 
WD40-rpts      __)                                                                             

Query      481 PSAVCREPYTGEIISIGLKQ 500 
WD40-rpts                          

1 WD40-repeats found in QUERY=ENSDARP00000103150 (Len=500):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg 13   313-403      4.01  280.42  0.01031       15.0%     11.31

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  313-403    NDDLSVTGTDNCTFSVCQKALGKDDFTKIPNGVNGVEDRMSVIWEKGVHSGKMDENRFVAVTSTNAAKIFNLYPRKGRIAKGSDADLVIWD

   WD40 Template    TGECLRTLSGHTSGV--------TSVSFSPDGKR------------------LV-------------------------SGSEDGTIKVWD