Input parameters:

  Query = ENSDARP00000102872 (Len=1157)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000102872, Len=1157):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 EEERHVRANDRDYNERFSYADNRIKTAKYNVFTFLPINLFEQFQRFANAYFLVLLILQLIPEISSLSWFTTIVPLVLVLA 80  
WD40-rpts                                                                                      

Query       81 ITAVKDATDDYFRHKSDQQVNTRQSQVLIKGKLQNEKWMNVRVGDVIKLENNQFVAADLLLLSSSEPYGLCYIETAELDG 160 
WD40-rpts                                                                                      

Query      161 ETNLKVRQALTVTSDLGDDVAKLADFNGKGEVICEPPNNKLDKFIGTLYWKDNKYPLDNEKMLLRGCVLRNTEWCFGLVI 240 
WD40-rpts                                                                                      

Query      241 FAGLQTKLMQNCGRTKFKRTSIDKLMNTLVLWIFGFLICMGIILAIGNTIWEQSVGSDFWAYLQWKELTVNAVFSGFLTF 320 
WD40-rpts                                                                                      

Query      321 WSYIIILNTVVPISLYVSVEVLRLGHSYFINWDRRMYYSRKDTPAEARTTTLNEELGQVEFIFSDKTGTLTQNIMVFNKC 400 
WD40-rpts                                                                                      

Query      401 SINGKTYGDVFDEFGHKVDITEKTPCVDFSFNPLMDRKFRFHDSSLVEAIKLEEPLVQEFFRLLALCHTVMPEERNEGEL 480 
WD40-rpts                                                                                      

Query      481 VYQAQSPDEGALVTAARNFGFVFRSRTPETITLYEMGQAVTYQLLAILDFNNVRKRMSVIVRNPKGQLKLYSKGADTILF 560 
WD40-rpts                                                                                      

Query      561 DRLDPSNEELMFTTSEHLNEFAGEGLRTLALAYKDLDEDVFDEWTKKLLFASTALDNREEKLGALYEEIEQGMMLLGATA 640 
WD40-rpts                                                                                      

Query      641 IEDKLQEGVPETIACLTLANIKIWVLTGDKLETAMNIGYSCNMLRDDMNEVFIISGHTMLEVQQELRTAKERIMGPSKDK 720 
WD40-rpts                                                                                      

Query      721 FSSGLDMEKTELYSVDSVFEETIIAEYALIINGHSLAHALEAELEQILVDVACLCKSVICCRVTPLQKALVVELIKRHKR 800 
WD40-rpts                           (_______________________________________WD 1_______________

Query      801 AVTLAIGDGANDVSMIKTAHIGVGISGQEGMQAVLASDYSFAQFRYLQRLLLVHGRWSYHRMCNFLCYFFYKNFAFTLVH 880 
WD40-rpts      ________________________)                                                       

Query      881 FWYGFLCGFSAQTVYDQWFITLFNIVYTSLPVLAMGLFDQDVNEQYSLRYPNLYRPGQLNQLFNKRKFFTCTLQGVYTSF 960 
WD40-rpts                                                                                      

Query      961 ILFFIPYGAFMPAVRDDGAQISDQQAFAVTIATSLVIVVSVQIGLDTNYWTAVNHFFIWGSLAVYFAILFAMNSNGIFTI 1040
WD40-rpts                                                                                      

Query     1041 FPNQFPFIGSARNSLNQKIVWLVILLNTVVCIMPMLAVRFIKTDLYPTHTDKVRLLQQATRRQRPQEQNLRRVRRTSSRR 1120
WD40-rpts                                                                                      

Query     1121 SAYAFSHQQGYGELITSGKNMKVPTSSTSTYPLSSPS 1157
WD40-rpts                                           

1 WD40-repeats found in QUERY=ENSDARP00000102872 (Len=1157):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg 25   742-825      2.91  235.04  0.04152       20.0%     26.10

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  742-825    TIIAEYALIINGHSLAHALEAELEQILVDVACLCKSVICCRVTPLQKALVVELIKRHKRAVTLAIGDGANDVSMIKTAHIGVGI

   WD40 Template    TGECLRTLSGH----------------------TSGVTSVSFSPDG----------------KRLVSGSED------GTIKVWD