Input parameters:

  Query = ENSDARP00000102659 (Len=782)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000102659, Len=782):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MSLQRMFSCSRLLARPNALQTFRRAASQGKMPLARAHGKSFAHRSELRQAKRIVVKLGSAVVTRGDECGLALGRLASIVE 80  
WD40-rpts                                                                                      

Query       81 QVAMLQNQGREMMIVTSGAVAFGKQRLRHEILLSQSVRQALHSGQNQLKDMSLPVLEARACAAAGQSGLMALYEAMFTQY 160 
WD40-rpts                                                                                      

Query      161 STCTAQILVTNLDFHDEQKRRNLNSTLYELLRMNIVPIINTNDAVVPPPEPNSDLQGVNVISIKDNDSLAARLAVEMRAD 240 
WD40-rpts                                                                                      

Query      241 LLIALSDVEGLYDSPPGSDDAKLLDTFYPGDQQSITYGTKSRVGIGGMEAKVKAALWALQGGTSVVIANGTHPKVTGHVI 320 
WD40-rpts                                                                                      

Query      321 TDIVEGKKVGTFFSEVKPAGPTVEQQTEMARSAGRTLASLEPEQRSDIICALADLLTERKEEILSANKKDMENAVNTGRL 400 
WD40-rpts                                                                                      

Query      401 SPAMLKRLSLSSSKLNSLSIGLRQIAVSSQDSVGRVLRRTRVANNLELEQITVPIGVLLVIFESRPDCLPQVSALAIASG 480 
WD40-rpts                                                                                     (

Query      481 NALLLKGGKEAANTNRILHELAQEALSIHGVKDAIQLVSTREEVEDLCRLEKMIDLIIPRGSSQLVRDIQRAAKGIPVLG 560 
WD40-rpts      ___________________________________________WD 1_________________________________

Query      561 HSEGICHVYVDHEASIDKAIKIIRDSKCDYPAACNAMETLLVHRDLLRTPVFDQIIDMLRTEQVKIHAGPKFASYLTFSP 640 
WD40-rpts      _________)                                                                      

Query      641 SEVKSLRTEYGDLECCIEVVDSMQEAIDHIHKYGSSHTDVIVTENENTAEQFLQQLDSACVFWNASSRFADGYRFGLGAE 720 
WD40-rpts                                                                                      

Query      721 VGISTARIHARGPVGLEGLLTTKWVLRGEGHTVADFSEHGSMTYLHENLPVAQLLPGYRTTS 782 
WD40-rpts                                                                    

1 WD40-repeats found in QUERY=ENSDARP00000102659 (Len=782):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg 12   480-570      2.85  232.19  0.04528       25.0%     26.73

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  480-570    GNALLLKGGKEAANTNRILHELAQEALSIHGVKDAIQLVSTREEVEDLCRLEKMIDLIIPRGSSQLVRDIQRAAKGIPVLGHSEGICHVYV

   WD40 Template    TGECLRTLS---------------------GHTSGVTSVSF-----------------SPDGK-------------RLVSGSEDGTIKVWD