Input parameters:

  Query = ENSDARP00000102255 (Len=1903)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000102255, Len=1903):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MHSRILFKGTAAAVAARRIRHILGPLMSKEGWNCSAHEVKLLNTSSGDTVKIGEISYVLKTPKNPELVPVNHMMEALPQM 80  
WD40-rpts                                                                                      

Query       81 VTQHLRWIMQKDLLGQDVFLIGPPGPLRRSIAMQYLELTKREVEYVALSRDTTETDLKQRREIRSGTAFYIDQCAVRAAT 160 
WD40-rpts                                                                                      

Query      161 EGRILVLEGLEKAERNVLPVLNNLLENREMQLEDGRFLMSAHRYDKLLEEHTKEELDAWKIVRVSEDFRVIALGLPVPRY 240 
WD40-rpts                                                                                      

Query      241 KGNPLDPPLRSRFQARDIYYLPFKDQLEHLYRIGANVSAERVSQLLSFATTLCSQESASLSLPDFPVDNLPSALTVLNLF 320 
WD40-rpts                                                                                      

Query      321 PMLSVQQLVQRLYPYEAMLGKEGRTAVEGVLNRFELTDGSTKPSPTAVVNIEPVNGGQAEQAAVTLNITNQKITFQVPSG 400 
WD40-rpts                                                                                      

Query      401 TRPIRPPNSSPTFINTPTHERLLAEMMQSHLVKDICLIGAKGCGKSVIAREFAEMLGYSIEPVMLYQDMTARDLLQQRYT 480 
WD40-rpts                                                                                      

Query      481 LPNGDTAWRASPLVTAAQEGKLVLLDGIHRVNLGTLAVLSRLLHDRELDLYDGTRLLRFDRYQALKEELQLTDQQLQDRS 560 
WD40-rpts                                                                                      

Query      561 IFPIHPSFRIIALAEPPVIGSTTQQWLNPEILTMFLFHTIKPLAKAEETAVLQGMIPNVPGEAVEQLQHLTHSLRKSNDP 640 
WD40-rpts                                                                                      

Query      641 TALSLASSLSTRQLLRICRRLSQYPQESVAHAVHKACLSSRRFLPSLARSSLEKSLANCSIEDHPDPASEQKQLYTCTVK 720 
WD40-rpts                                                                                      

Query      721 DGLLTIGNVSAPVYSPDEKMKVPDVLFYENVQHMMVMQDMLKDFLLGEHLLLVGNQGVGKNKIVDRFLHLMNRPREYLQL 800 
WD40-rpts                                                                                      

Query      801 HSRDTTVQTLTLQPSVRDGIIIYEDSPLVKAVKMGHILVIDEADKAPTNVTCILKALVESGEMILADGRRIVSGTDALEA 880 
WD40-rpts                                                                                      

Query      881 AGRPNAIPMHPDFRMIVLANRPGFPFLGNDFFGALGDIFSCHAVDNPKPQAEFAMLKQYGPDVPDAVLQKLVAAFGELRA 960 
WD40-rpts                                                                                      

Query      961 MADQGTITYPYSTREVVNIVKHLQKFPDEGLANVVRNVFDFDSYNKDMREVLISALHKHGIPIGAKPTSVHLAKELPLPD 1040
WD40-rpts                                                                                      

Query     1041 CKMTGYWTISQGGNTRRKLLCPTETHRIDIKGPVFLRVQSYPSKRHESRSLSFTEEQAHWQIPMNEVNIVCDVTTAKGKH 1120
WD40-rpts                                                                                      

Query     1121 SIYVATCNPVSLYAMKEKGDSVQCIELYDIFPRTISGVWQPFVSVAALGNPLQDQVVLHKSQGNTVLHLDLVTGAVRRLI 1200
WD40-rpts                                                                                      

Query     1201 LSQDKQDEAPRKTSNWWNSKESQPGYKMCKEFAHKNWLLFYKENGNQLDVVDVLEGQVHTIHLPINLKAVFLVAEDRWLL 1280
WD40-rpts                                                 (_________________WD 1_______________

Query     1281 VESKTDRKFLLTKPMHMGAEETGVCQLHAISEDAVSSGFGNNSGMEAVSPQEVSSDQLSNENLSAALGQKIVSPNRILCD 1360
WD40-rpts      __)                                                                             

Query     1361 TNTYANVIVGFPDLMSPNELYSFRRSLPITESRRPDMFFGSSKRTGPAKRVNCVCLLDANQVVRALPPTQVPLAEVYPKD 1440
WD40-rpts                                                                                      

Query     1441 VTPPMSAAYLEVTDLNSKRLKYIPVPRSNSMSPYTVWISKVSDTDVVMAPLGSGGVVTVDMGGYVRLWETGLDHLQRSLL 1520
WD40-rpts                                                                                      

Query     1521 EWRNMIGSEDGRPVQITIERDSGLDVSSPKHGKIDAKNAPHVGGNQWAGGTGGRDTAGLGGKGGPYRLDAGHKVYQISQA 1600
WD40-rpts                                                                                      

Query     1601 EKDAVPDEVKRAARDMAEQAFKQRLKEIEMSEYDASTYDRFSGAVRRQVQSLRIILDSLQAKGKERQWLRNQALGELDDA 1680
WD40-rpts                                                                                      

Query     1681 KIIDGLTGEKSIYKRRGELEPELGSPQQKPKRLRVLADVSGSMYRFNGVDGRLERSMEAVCMVMEALESYEHKFKYDITG 1760
WD40-rpts                                                                          (___________

Query     1761 HSGDGFDIELVRCDKVPKNNKERLKVLKTMHAHSQFCMSGDYTLEGTEHAIRELAHEEADEHFVIVLSDANLERYGISPD 1840
WD40-rpts      ___________________________WD 2_____________________________________)           

Query     1841 RFARVLTSNPQVNAFAIFIGSLGDQADRLQKTLPAGRSFVAMDTKEIPQILQQIFTSTMLSSA 1903
WD40-rpts                                                                     

2 WD40-repeats found in QUERY=ENSDARP00000102255 (Len=1903):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg 41  1244-1283     3.18  246.09  0.02965       17.5%     42.75
  WD 2:  Seg 59  1749-1829     3.10  242.57  0.03301       22.5%     11.53

Multiple sequence alignment of 2 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1 1244-1283   NGN--QLDVVDVLEGQVHTIHLPINLKAVFLV------------------AEDRW---------------------LLVES
   WD 2 1749-1829   SYEHKFKYDITGHSGDGFDIELVRCDKVPKNNKERLKVLKTMHAHSQFCMSGDYTLEGTEHAIRELAHEEADEHFVIVLSD

   WD40 Template    TGE--CLRTLSGHTSGVTSVSFSPDGKRLVSG------------------SEDGT---------------------IKVWD