Input parameters:

  Query = ENSDARP00000102210 (Len=393)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000102210, Len=393):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 TKKRSHVLGESATAMDALEDTFRTLAIARRLQPSEATYILDVSLAASDVLAVCCSNHSVHLHNRETLHQVGQFQGHTAPV 80  
WD40-rpts                                    (______________WD 1_____________)   (_____________

Query       81 CGVRFSHMSPHLLFSGSADGTIRSWDIRRPDSDSVQVFRSDPTHSYCSFDVSCTDRVLCAGTEQVEEDSFLVFWDARMVQ 160 
WD40-rpts      ____WD 2_________________)      (___________________WD 3__________________)     

Query      161 DRGPLGVYSESHSDDVTAVKFHPQQADRLASGGTDGLVNVFDLSLGGEDDALVTTCNCNSSASSLCWTGKDLDRLLCLTH 240 
WD40-rpts        (_________________WD 4_________________)       (_________________WD 5_________

Query      241 DEGLHLWDVARPDSDDTLTLLSSADARPLVQLPDGVSLEYFIGGTWLPDEERTLLVGGSNQGELHLLDCSGSGLRLIKSL 320 
WD40-rpts      _______)   (__________________________WD 6_________________________)(___________

Query      321 KGGHSATVRCFQWDAIGRSLVTGGEDGQLLQWKAGAEEISVGKKESLKSISSMQLKTKAHRKQTTKTDWSKVA 393 
WD40-rpts      _________WD 7___________________)(________________WD 8_______________)   

8 WD40-repeats found in QUERY=ENSDARP00000102210 (Len=393):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1    31-63       5.57  344.86  0.00140        7.5%     41.90
  WD 2:  Seg  4    67-106      8.76  476.54  2.3e-05       42.5%     56.30
  WD 3:  Seg  8   113-155      5.86  356.77  0.00097       25.0%     54.22
  WD 4:  Seg 12   163-202      8.17  452.11  5.0e-05       37.5%     45.56
  WD 5:  Seg 15   210-248      6.45  381.21  0.00045       20.0%     51.95
  WD 6:  Seg 19   252-308      5.15  327.36  0.00241       27.5%     44.94
  WD 7:  Seg 23   309-353      8.87  481.24  2.0e-05       27.5%     47.86
  WD 8:  Seg 26   354-390      5.11  325.73  0.00254       12.5%     16.19

Multiple sequence alignment of 8 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   31-63     -----------LQP-SEATYILDVSLAA-SDV------------------LAVCCS----NHSVHLHN
   WD 2   67-106    -L-----HQVGQFQ-GHTAPVCGVRFSHMSPH-----------------LLFSGSA----DGTIRSWD
   WD 3  113-155    -D-----SVQVFRS-DPTHSYCSFDVSC-TDR-----------------VLCAGTEQVEEDSFLVFWD
   WD 4  163-202    -G-----PLGVYSE-SHSDDVTAVKFHPQQAD-----------------RLASGGT----DGLVNVFD
   WD 5  210-248    -D-----ALVTTCN-CNSSASSLCWTGK-DLD-----------------RLLCLTH----DEGLHLWD
   WD 6  252-308    -P-----DSDDTLTLLSSADARPLVQLP-DGVSLEYFIGGTWLPDEERTLLVGGSN----QGELHLLD
   WD 7  309-353    CSGSGLRLIKSLKG-GHSATVRCFQWDA-IGR-----------------SLVTGGE----DGQLLQWK
   WD 8  354-390    -A-----GAEEISV-GKKESLKSISSMQ-LKT-----------------KAHRKQT----TKTD--WS

   WD40 Template    TG-----ECLRTLS-GHTSGVTSVSFSP-DGK-----------------RLVSGSE----DGTIKVWD