Input parameters:

  Query = ENSDARP00000101986 (Len=594)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000101986, Len=594):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 NSHSTNLVREMQDTVNMAAESEFEEEEPPFSDAEDFEDDVEDEELLEDVLRDRPLEADGIDSVVVVDNVPQVGPERLEKL 80  
WD40-rpts                                                                                      

Query       81 KNVIHKIFSKFGKITNEFYPEAAGTTKGYIFLEYASPNQALEAVKSADGYKLDKQHTFRVNLFTDFDKYMNISDLWETPE 160 
WD40-rpts                                                                                      

Query      161 KQPFKDFGNMRHWLEDPDCRDQYSVIYESGERTAIFSNDPKEPILVEERARWTETYVRWSPKGDHLTFHQRGIALWGGEK 240 
WD40-rpts                                              (________________WD 1_______________)(__

Query      241 FKQIQRFSHQGVSLIDFSPCERYVVTFSPLMDTKEDPQAIIIWDILTGQKKRGFHCESSAHWPIFKWSQDGKFFARMTQD 320 
WD40-rpts      ___________________WD 2____________________)   (_________________WD 3___________

Query      321 TLSIYETPSMGLLDKKSLKISGIKDFSWSPGDNIIAFWVPEDKDIPARVTLMHFPSRSEIRVRNLFNVVDCKLHWQRQGD 400 
WD40-rpts      _____)   (___________________WD 4___________________)   (_________________WD 5__

Query      401 YLCVKVDRTPRGTQGVVTNFEIFRMREKQVPVDVVEMKESIIAFAWEPNGSRFAVLHGESPRINASFYHVKSNGKIELIK 480 
WD40-rpts      ______________)           (___________________WD 6__________________)    (______

Query      481 MFDKQQANSIFWSPQGQFMVLAGLRSMNGALAFVDTSDCTIMYIAEHYMASDVEWDPTGRYVVTSVSWWSHKVDNAYWLW 560 
WD40-rpts      ____________WD 7__________________)(____________________WD 8____________________

Query      561 TFQGRLLQKNNKDRFCQLLWRPRPPTLLSQEQIK 594 
WD40-rpts      )                                 

8 WD40-repeats found in QUERY=ENSDARP00000101986 (Len=594):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  7   201-237      3.74  269.26  0.01455       22.5%     49.00
  WD 2:  Seg 11   238-284      5.53  343.20  0.00147       25.0%     49.74
  WD 3:  Seg 15   288-326      3.45  257.34  0.02100       22.5%     50.23
  WD 4:  Seg 19   330-373      4.25  290.08  0.00765       17.5%     36.50
  WD 5:  Seg 23   377-415      3.01  238.89  0.03693        7.5%     45.27
  WD 6:  Seg 27   427-469      4.87  315.79  0.00345       10.0%     44.40
  WD 7:  Seg 31   474-515      4.39  296.09  0.00635       22.5%     45.01
  WD 8:  Seg 35   516-561      5.42  338.74  0.00169       20.0%     54.70

Multiple sequence alignment of 8 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  201-237    -KEPILVEERARWTETYV-RWSPKGDHLT-----FH---------------QRGIALWG
   WD 2  238-284    GEKFKQIQRFSHQGVSLI-DFSPCERYVV-----TFSPLMDTKED------PQAIIIWD
   WD 3  288-326    -GQKKRGFHCESSAHWPIFKWSQDGKFFA-----RMT-------Q------D-TLSIYE
   WD 4  330-373    -MGLLDKKSLKISGIKDF-SWSPGDNIIAFWVPEDKD-------I------PARVTLMH
   WD 5  377-415    -RSEIRVRNLFNVVDCKL-HWQRQGDYLC-----VKV-------D------RTPRGTQG
   WD 6  427-469    EKQVPVDVVEMKESIIAF-AWEPNGSRFA--VLHGES-------P------RINASFYH
   WD 7  474-515    -GKIELIKMFDKQQANSI-FWSPQGQFMV--LAGLRS-------M------NGALAFVD
   WD 8  516-561    TSDCTIMYIAEHYMASDV-EWDPTGRYVV-----TSV-------SWWSHKVDNAYWLWT

   WD40 Template    TGECLRTLSGHTSGVTSV-SFSPDGKRLV-----SGS-------E------DGTIKVWD