Input parameters:

  Query = ENSDARP00000101604 (Len=1621)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000101604, Len=1621):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MGNVESQNGDLAYYSQGHGHISRKHMTRSLRISNKQSRRSRHASTSKVEHRNSESSTKSSSTPSIPQSLSENGLEPFSEK 80  
WD40-rpts                                                                                      

Query       81 NALESYGGTIWVDRMAMNLRPMSFHDNIGDPTITPGSEDGVEMDTVVPDGCDDDGLFTGEDTYLQRTRDGPREGGSFKKK 160 
WD40-rpts                                                                                      

Query      161 RSKSADMWRDDSMEFSLSDLSQEHLTSTEEIIGTNEDEDKGFANCGGRRRTSSPRTLESHSGERANSLDELCTQRLPPLR 240 
WD40-rpts                                                                                      

Query      241 GSHHLYNGHNTERTEGIMNGEILSPAEEEGNGYGAYTLPCRRSHCLSEGLSNHQTTICSRMQGRRAQTTHDITAGEGSEY 320 
WD40-rpts                                                                                      

Query      321 GDSGIDGGAAEVEHSSRRCKAMSASFSVYSTASESIFAGSDSGSSSGGGGDRQQGGDQGVYENFRQELDMNSRQTRECLE 400 
WD40-rpts                                                                                      

Query      401 EASSAASDERSSGTLSSIYPSDILLTAVQGTVRKAGMLAVKNFLVHKKNKRVEPAAKRKWKQYWVSLKGCTLFFYETDGR 480 
WD40-rpts                                                                                      

Query      481 SGIDHNSIHKHAVWVENSIVQAVPEHPKKDFVFCLSNALGDAFLFQTSGQTELENWITAIHSACAAAVARQHHREDTVRL 560 
WD40-rpts                     (_____________________________________________WD 1_______________

Query      561 LRSEIKKLEQKIDMDEKMKKMGEMQLSAVTDGKKRKTILDQIFLWEQNLEQFHMDLFRYRCYLSSLQGGELPNPKRLLAV 640 
WD40-rpts      ______________________________)                                                 

Query      641 ASRPTKLSMGRLGIFSVSSFHALVAARTDGGIRRRTQALSRSSSKRKSRFSSLWGLDTTSKKKTKGRPSINQVFVDGEQP 720 
WD40-rpts                                                                                      

Query      721 VKRNLEHMFEDTGKNTLHKDKDGSLKSLPQHKTDNEVWVPDYLTPSWVSLPDDRPVLAIIQPGETAMEALEALCKVHKLE 800 
WD40-rpts                                                                                      

Query      801 LSKHYIRLKFLIDNQVQLYVPRPEEDLCDLLYKEIEICAKTTKVIQFDRDESCAIGYGFSVAVVEEDGGQQLHITDVKAG 880 
WD40-rpts                                                                                      

Query      881 GLAFAKGLRAGDEILKLNSKPASVLELADMQAAFALPSLTLTVSTLPAADPHQLCQLPPRRSDGAQDLCTDIFSQSQEDI 960 
WD40-rpts                                                                                      

Query      961 LDEGLGLVLHSPDDTGDDRVNLMAESPADSLEDEIDSAHKSTEQVTAFCRNLHDMNSNEGPVSCSSSSSTSSSSSSCMPS 1040
WD40-rpts                                                                                      

Query     1041 PISPLPGLFTPRQLSDADKLRKVISELVDTERTYVKDLNILIERYLNPLQKESFLTQDELDVLFGNLAEMVEFQVEFLKT 1120
WD40-rpts                                                                                      

Query     1121 LEDGTRLVPDLDKLERVDQFKKVLFSLGGSFLYYADRFKIYSAFCASHTKVPKVLTKAKTDPEFKAFLAERNPRQQHSST 1200
WD40-rpts                                                                                      

Query     1201 LESYLIKPIQRVLKYPLLLRELYSLTDPDSEEHYHLDVAMKAMNKVASHINEMQKIHEEYGAVFDQLISEQSSEKKEVAD 1280
WD40-rpts                                                                                      

Query     1281 LSMGDLLLYDTVVWINPPSSLMKGKRDPELAAFVFRTAVVFVCKDCSKQKKKIGGPHRVSTLDERDPFRFRHMISTDALQ 1360
WD40-rpts                                                                                      

Query     1361 VRNLPNSEGSAMCEIVHVRSEFEGRPERTFHICCSSPESKKDFLKTVHSILRDKQRRQLMKTESLPPNQQYIPFGGKRLC 1440
WD40-rpts                                                                                      

Query     1441 ALKGSRPTMNRAVSAPSRTLGQRKLIRNRITIDTGVIFDDDSSQDLSPITPTEPPFHKPQQPIRDTDRWVEDQFDLQIYE 1520
WD40-rpts                                                                                      

Query     1521 NQDDVKETDILSDDDEYCQSVRAPSSDPSLEESFEALSVEGDEDKGLNGLSEDKSKKSHAPLKLTLLRKQCAVEGVSSER 1600
WD40-rpts                                                                                      

Query     1601 DCEVIWVRRDDFKNSCNSDIF 1621
WD40-rpts                           

1 WD40-repeats found in QUERY=ENSDARP00000101604 (Len=1621):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  8   496-591      2.86  232.75  0.04451       20.0%     22.70

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  496-591    ENSIVQAVPEHPKKDFVFCLSNALGDAFLFQTSGQTELENWITAIHSACAAAVARQHHREDTVRLLRSEIKKLEQKIDMDEKMKKMGEMQLSAVTD

   WD40 Template    TGECLRTLSGH--TSGVTSVSFSPDGKRLVSGSE-------------------------------------------DG-----------TIKVWD