Input parameters:

  Query = ENSDARP00000101591 (Len=937)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000101591, Len=937):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MKFAYKFSNLLGAFYRQGNISFSKNGDSVISPVGNRISVFDLKNNKSETLPVSTSKNIACFDISPDGNLAILIDEDGAAI 80  
WD40-rpts        (_________________WD 1________________)   (_________________WD 2______________

Query       81 LVSLVTRAVLHHHHFHNPVHNVSFSPDGRKFVVTKENVALMYHAPGRNKEFNAFALNKTFYGPFDEMTCIDWTDDSKCFA 160 
WD40-rpts      __)   (________________WD 3________________)(_____________________WD 4__________

Query      161 VGSKDMTTWIFGAERWANLIYYSLGGHKDIIVGCFFEKDSLDMYTVSQEGTLCIWESDTDLEGLRKGPKYAERKEKEQKK 240 
WD40-rpts      ___________)     (_________________WD 5________________)                    (___

Query      241 LRVLEMEEDEANDIEIMGEDGETRGDVIKGSAETPEEVEGIKNVRYLQKSKYYFNKEGDFNKLTAAAFHKRTHILVTGFA 320 
WD40-rpts      ________________WD 6___________________)         (_________________WD 7_________

Query      321 SGAFHLHELPGFDLIHSLSISDQRISAISLNPTGDWISFGCSGLGQLLVWEWQSESYVFKQQGHFNNMNSLAYSPDGQYL 400 
WD40-rpts      _______)   (_________________WD 8_________________)   (_________________WD 9____

Query      401 ATGGDDGKVKVWNTNSGLCFVTFTEHSSGVTEVAFTSSGFVVVSASLDGTVRAFDLHRYRNFRTMTSPRPAQFSSLAVDG 480 
WD40-rpts      ____________)   (_________________WD10________________)(___________________WD11_

Query      481 SGELVCAGSQDSFEIFLWSMQTGRLLEVLSGHEGPVSNLCFSPVQSVLASVSWDKTVRLWDMLDSWQTKETLQLTSDGLA 560 
WD40-rpts      __________________)   (_________________WD12________________)   (_______________

Query      561 VTYHPNGMELAVASLDGEITFWNPQTGRQTGSITGRHDLQMGRKESEKITAKQSAKGKSFTTLCYSADGESILTGGKSKF 640 
WD40-rpts      __WD13________________)                             (______________WD14_________

Query      641 VCIYNIKEHLLMKKFEISCNLSLDAMEEFLDRRKMTEFGSLSLVDEGTGDGNGVELSLPGVKKGDMSTRCFKPEISVSSL 720 
WD40-rpts      ____)                                                          (________________

Query      721 RFSPTGRSWAAASTEGLLIYSLDAALVFDPYDLDIDVTPTSIRQQITKKEWASAILLSFRLNEILLIREVLEAIPFDQIT 800 
WD40-rpts      WD15________________)                                                           

Query      801 VVCSSLPDVYVDKLLNFVASTLEKSNHLQFYLTWAQCLLTLHGQKLKNRPGFVLPTVQQLLKSIQRHSDDLSKLCDWNIY 880 
WD40-rpts                                                                                      

Query      881 NIRYAAALAKQRGLKRTASEIYGAEKEDSSEAMDSEGDEENMTNEPIMLENAIQLSD 937 
WD40-rpts                                                               

15 WD40-repeats found in QUERY=ENSDARP00000101591 (Len=937):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     3-41       4.90  317.24  0.00330       25.0%     41.20
  WD 2:  Seg  4    45-83       6.27  373.48  0.00058       17.5%     57.26
  WD 3:  Seg  8    87-124      5.45  339.60  0.00165       30.0%     54.45
  WD 4:  Seg 12   125-172      7.30  416.11  0.00015       25.0%     50.33
  WD 5:  Seg 16   178-216      7.63  429.85  0.00010       22.5%     50.54
  WD 6:  Seg 20   237-280      5.30  333.55  0.00199       20.0%     42.35
  WD 7:  Seg 25   290-328      6.67  390.38  0.00034       17.5%     56.86
  WD 8:  Seg 29   332-371      6.56  385.81  0.00039       25.0%     55.08
  WD 9:  Seg 33   375-413      9.48  506.20  9.4e-06       35.0%     58.59
  WD10:  Seg 37   417-455     10.12  532.57  4.1e-06       45.0%     56.40
  WD11:  Seg 41   456-499      5.11  325.70  0.00254       20.0%     54.82
  WD12:  Seg 45   503-541     10.02  528.70  4.7e-06       42.5%     56.88
  WD13:  Seg 49   545-583      7.51  424.92  0.00012       27.5%     57.38
  WD14:  Seg 54   613-645      5.25  331.49  0.00212       15.0%     45.87
  WD15:  Seg 61   704-741      5.15  327.22  0.00242       22.5%     49.70

Multiple sequence alignment of 15 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    3-41     FAY--------KFSNLLGAFYRQGNIS-FSKNGDS---VISP-VGN--RISVFD
   WD 2   45-83     -NK--------SETLPVSTSKNIACFD-ISPDGNL---AILI-DEDG-AAILVS
   WD 3   87-124    -RA--------VLHHHHFHNP-VHNVS-FSPDGRK---FVVT-KENV-ALMYHA
   WD 4  125-172    PGRNKEFNAFALNKTFYGPFDEMTCID-WTDDSKC---FAVG-SKDM-TTWIFG
   WD 5  178-216    -NL--------IYYSLGGHKDIIVGCF-FEKDSLD---MYTV-SQEG-TLCIWE
   WD 6  237-280    EQK--------KLRVLEMEEDEANDIEIMGEDGETRGDVIKG-SAET-PEEVEG
   WD 7  290-328    -SK--------YYFNKEGDFNKLTAAA-FHKRTHI---LVTG-FASG-AFHLHE
   WD 8  332-371    -FD--------LIHSLSISDQRISAIS-LNPTGDW---ISFGCSGLG-QLLVWE
   WD 9  375-413    -ES--------YVFKQQGHFNNMNSLA-YSPDGQY---LATG-GDDG-KVKVWN
   WD10  417-455    -GL--------CFVTFTEHSSGVTEVA-FTSSGFV---VVSA-SLDG-TVRAFD
   WD11  456-499    LHR-----YRNFRTMTSPRPAQFSSLA-VDGSGEL---VCAG-SQDSFEIFLWS
   WD12  503-541    -GR--------LLEVLSGHEGPVSNLC-FSPVQSV---LASV-SWDK-TVRLWD
   WD13  545-583    -SW--------QTKETLQLTSDGLAVT-YHPNGME---LAVA-SLDG-EITFWN
   WD14  613-645    ---------------QSAKGKSFTTLC-YSADGES---ILTG-GKSK-FVCIYN
   WD15  704-741    -GD--------MSTRCFKPEISVSSLR-FSPTGRS---WAAA-STEG-LL-IYS

   WD40 Template    TGE--------CLRTLSGHTSGVTSVS-FSPDGKR---LVSG-SEDG-TIKVWD