Input parameters:

  Query = ENSDARP00000101565 (Len=606)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000101565, Len=606):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MSYELKRVFASLPHMERGVAKVLGGDPKGNNFLYTNGKSVIIRNIENPAIADVYTEHPHQVIVAKYCPSGFYIASGDVSG 80  
WD40-rpts          (_________________WD 1_________________)   (_________________WD 2___________

Query       81 KVRIWDTTQKEHLLKYEYQPFGGKIKDIAWTEDSKRLAVVGEGREKFGAVFLWDTGSSVGEIVGHSKIINSVDIKQTRPY 160 
WD40-rpts      _____)(_____________________WD 3_____________________)(__________________WD 4___

Query      161 RLVTGSDDNCTTFLEGPPFKFKCTMTVSRHVCVFVSKGSSLYSTFSTTEPMLLRRHQNTEKYSNLGGEKAHDGGIYAVSW 240 
WD40-rpts      ______________)(_________________WD 5_________________)         (_______________

Query      241 SPDSTQLISASGDRTVKLWDVGSGTSVSTFSLGSDVLDQQLGCLWVNKHLLSVSLSGYINYLDRNNPNRPLRTIKGHTKS 320 
WD40-rpts      WD 6_______________)   (_________________WD 7_________________)    (____________

Query      321 IQCVTVHKADGRTSIYSGSHDGHINYWDAESGENEAFVGKGVHKTVIHLSLKDAHMTAEENCFDNSLMRYVLLLLVVVVV 400 
WD40-rpts      ______WD 8_________________)    (_________________WD 9________________)   (_____

Query      401 VDVVAVVVHLICVSWGPGALSTTVLVVEVVVVGDHKRAQNKQTRLNLTSMISGAPSGQCVCVCVQDGKVHLYSVQGNTLK 480 
WD40-rpts      ____________WD10_________________)(_________________WD11________________)(______

Query      481 DDGKALEVQGPVTDMSYSKDGAFLAVTDEKKVVTVFTVADAYKEKSEFYGHHAKVVCLSWSPDNEHFATSGMDMMVYVWT 560 
WD40-rpts      _____________WD12___________________)(___________________WD13__________________)

Query      561 ASDTEKRIKLPDCHRLHHVSGLAWLNPNTLVTTSHDACIKQWTLKI 606 
WD40-rpts          (_________________WD14________________)   

14 WD40-repeats found in QUERY=ENSDARP00000101565 (Len=606):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     5-44       4.45  298.60  0.00588       10.0%     47.64
  WD 2:  Seg  5    48-86       8.73  475.31  2.4e-05       22.5%     47.30
  WD 3:  Seg  8    87-134      6.51  383.59  0.00042       22.5%     56.12
  WD 4:  Seg 12   135-175      9.23  496.04  1.3e-05       30.0%     55.94
  WD 5:  Seg 16   176-215      5.72  350.84  0.00116       10.0%     52.61
  WD 6:  Seg 21   225-260      9.09  490.35  1.5e-05       40.0%     43.56
  WD 7:  Seg 24   264-303      6.23  372.08  0.00060       25.0%     56.01
  WD 8:  Seg 28   308-348      7.23  413.41  0.00017       40.0%     51.45
  WD 9:  Seg 32   353-391      6.53  384.39  0.00041       10.0%     54.88
  WD10:  Seg 36   395-434      4.08  283.25  0.00945       12.5%     35.29
  WD11:  Seg 38   435-473      7.78  435.87  8.3e-05       12.5%     57.66
  WD12:  Seg 42   474-517      7.39  419.93  0.00014       22.5%     58.77
  WD13:  Seg 46   518-560      8.43  463.04  3.6e-05       25.0%     54.36
  WD14:  Seg 50   565-603      7.40  420.18  0.00014       22.5%     53.69

Multiple sequence alignment of 14 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    5-44     LK----R----V---FASLPHMERGVA-KVLGGDPKGN-N--F-LYTN-G----KSVIIRN
   WD 2   48-86     -P----A----I---ADVYTEHPHQ-V-IVAKYCPSGF-Y--I-ASGDVS----GKVRIWD
   WD 3   87-134    TT----QKEHLL---KYEYQPFGGK-I-KDIAWTEDSK-R--L-AVVGEGREKFGAVFLWD
   WD 4  135-175    TG----S----S---VGEIVGHSKI-I-NSVDIKQTRPYR--L-VTGSDD----NCTTFLE
   WD 5  176-215    GP----P----F---KFKCTMTVSR-H-VCVFVSKGSS-L--Y-STFSTT----EPMLLRR
   WD 6  225-260    ---------------LGGEKAHDGG-I-YAVSWSPDST-Q--L-ISASGD----RTVKLWD
   WD 7  264-303    -G----T----S---VSTFSLGSDV-LDQQLGCLWVNK-H--L-LSVSLS----GYINYLD
   WD 8  308-348    -N----R----P---LRTIKGHTKS-I-QCVTVHKADG-RTSI-YSGSHD----GHINYWD
   WD 9  353-391    -E----N----E---AFVGKGVHKT-V-IHLSLKDAHM-T--A-EENCFD----NSLMRYV
   WD10  395-434    -L----V----V---VVVVDVVAVV-V-HLICVSWGPG-A--LSTTVLVV----EVVVVGD
   WD11  435-473    -H----K----R---AQNKQTRLNL-T-SMISGAPSGQ-C--V-CVCVQD----GKVHLYS
   WD12  474-517    VQGNTLK----D---DGKALEVQGP-V-TDMSYSKDGA-F--L-AVTDEK----KVVTVFT
   WD13  518-560    VA----D----AYKEKSEFYGHHAK-V-VCLSWSPDNE-H--F-ATSGMD----MMVYVWT
   WD14  565-603    -E----K----R---IKLPDCHRLH-H-VSGLAWLNPN-T--L-VTTSHD----ACIKQWT

   WD40 Template    TG----E----C---LRTLSGHTSG-V-TSVSFSPDGK-R--L-VSGSED----GTIKVWD