Input parameters:

  Query = ENSDARP00000101341 (Len=403)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000101341, Len=403):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MAADGGRAALPCAFSPKSHQFLALCAQDGRLRIWNTESKTLQQEYVPSAHLSAACTCVTWGPCRAVQEVPQRKRRKCDAA 80  
WD40-rpts      (_______________WD 1______________)                            (________________

Query       81 SSAEQSDLLALGTAAGTILIYSTLKGDLHCTLDGGHSGPVNSVQWHPEDSVLYSGSDDTHIAEWDLKTGKVCCKWKADRS 160 
WD40-rpts      _WD 2________________)   (_________________WD 3_________________)   (___________

Query      161 AISSLCISPDGKMLLSAGMTIKMWDLETKEVYRKFTGHSTMVTTLCFATTRPPDSNGMYFLSGAVHDRLLSVWQVRSDGK 240 
WD40-rpts      _____WD 4_______________)   (____________________WD 5____________________)(_____

Query      241 DKNSVVSFTLTDEPQHIDLQTSNSKDEAVRLAVVCKDGQLHLFEHFLNGQCKKPLSPACSLQVSTMKGESPVPVPLLAAA 320 
WD40-rpts      ____________WD 6________________)   (_________________WD 7________________)     

Query      321 LCADRQNLMLAYGHHLQPVMEKTPFNTSERHTCLNRDVHATLSLSVDTTVSKVKTPVVNQQSKVLIPGVPGHKAPIKLTP 400 
WD40-rpts                  (__________________WD 8__________________)                          

Query      401 NEG 403 
WD40-rpts         

8 WD40-repeats found in QUERY=ENSDARP00000101341 (Len=403):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     1-35       5.62  346.79  0.00132       20.0%     40.56
  WD 2:  Seg  6    64-102      7.43  421.61  0.00013       15.0%     52.54
  WD 3:  Seg 10   106-145      8.98  485.49  1.8e-05       42.5%     56.19
  WD 4:  Seg 14   149-185      7.63  429.66  0.00010       37.5%     52.35
  WD 5:  Seg 18   189-234      6.65  389.38  0.00035       32.5%     55.55
  WD 6:  Seg 22   235-273      6.38  378.02  0.00050       15.0%     39.23
  WD 7:  Seg 25   277-315      7.08  407.00  0.00020       15.0%     47.00
  WD 8:  Seg 30   333-374      7.08  407.03  0.00020       12.5%     50.13

Multiple sequence alignment of 8 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    1-35     -------MAADG-GRA-ALPCAFSP------KSHQFL---ALCA-QDGRLRIWN
   WD 2   64-102    -RAV--QEVPQR-KRRKCDAASSAE------QS-DLL---ALGT-AAGTILIYS
   WD 3  106-145    -GDL--HCTLDGGHSGPVNSVQWHP------ED-SVL---YSGS-DDTHIAEWD
   WD 4  149-185    -GKV--CCKWKA-DRSAISSLCISP------DG-KML---LSAG-M--TIKMWD
   WD 5  189-234    -KEV--YRKFTG-HSTMVTTLCFATTRPPDSNG-MYF---LSGAVHDRLLSVWQ
   WD 6  235-273    ------VRSDGK-DKNSVVSFTLTD------EP-QHIDLQTSNS-KDEAVRLAV
   WD 7  277-315    -DGQ--LHLFEH-FLNGQCKKPLSP------AC-SLQ---VSTM-KGESPVPVP
   WD 8  333-374    GHHLQPVMEKTP-FNTSERHTCLNR------DV-HAT---LSLS-VDTTVSKVK

   WD40 Template    TGEC--LRTLSG-HTSGVTSVSFSP------DG-KRL---VSGS-EDGTIKVWD