Input parameters:

  Query = ENSDARP00000101197 (Len=694)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000101197, Len=694):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MSSTRQQQQQQSGGAAGSVPGTSSGSLCSLSSSGGTGGANSGNSAAQNGSSSGNGVSSRTLGSVADGQSARLGSLSRKRP 80  
WD40-rpts                                                                                      

Query       81 LYNGLINPYEDKSNDFVCPICFEMIEEAHMTKCGHSFCYKCIRQSLEDSNRCPKCNYIIDNVDQLYPNFLVNELILKQKQ 160 
WD40-rpts                                                                                      

Query      161 RSEEKRLKRDHPNGTKWQVFQDVLGADQENMDLANVNYILEYLLQKKKQLEAESQAAQRQILMEFLKEARRNKREQLEQL 240 
WD40-rpts                                                                                      

Query      241 QKELNFLEEDIKRVEEMSGMYSPISDMDCNSDSTVPQVEAPSPAPSSSIIDPSEYIQPPFGGNSQSKRQTWYNSTLASRR 320 
WD40-rpts                                                                                      

Query      321 KRLTAHFEDLEQCYFSNRMSRITDDSRTVNQLDDFMECLSKFTRYNSVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFA 400 
WD40-rpts                                                           (_________________WD 1_____

Query      401 IAGVTKKIKVFEYGTVIQDAVDIHYPVNEMTCNSKISCISWSSYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHEKRCW 480 
WD40-rpts      ___________)          (_________________WD 2_________________)   (______________

Query      481 SVDFNLMDPKLLASGSDDAKVKLWSTNLDNSVASIEAKANVCCVKFSPTSRYHLAFGCADHCVHYYDLRNTKQPIMVFKG 560 
WD40-rpts      ___WD 3_________________)   (_________________WD 4________________)    (________

Query      561 HRKAVSYAKFVNGEEIVSASTDSQLKLWNVNKPHCLRSFKGHINEKNFVGLASNGDYVACGSENNSLYLYYKGLSKTLLT 640 
WD40-rpts      ________WD 5________________)   (_________________WD 6________________)   (_____

Query      641 FKFDTVKSVLDKDKKEDDTNEFVSAVCWRALPDGESNVLIAANSQGTIKVLELV 694 
WD40-rpts      _____________________WD 7__________________________)  

7 WD40-repeats found in QUERY=ENSDARP00000101197 (Len=694):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  3   374-412      7.23  413.42  0.00017       22.5%     48.02
  WD 2:  Seg  6   423-462      6.11  367.06  0.00070       25.0%     43.93
  WD 3:  Seg  9   466-505      8.22  454.04  4.7e-05       35.0%     52.02
  WD 4:  Seg 13   509-547      5.92  359.40  0.00089       22.5%     53.47
  WD 5:  Seg 17   552-589      7.60  428.69  0.00010       27.5%     52.51
  WD 6:  Seg 21   593-631      8.43  462.77  3.6e-05       25.0%     55.23
  WD 7:  Seg 25   635-692      3.90  275.83  0.01188       27.5%     55.47

Multiple sequence alignment of 7 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  374-412    LSYASDLYNGS---------------SIVSSIEFD-R----DCD-Y-FAIAGVTKKIKVFE
   WD 2  423-462    IHYPVNEMTCN---------------SKISCISWS-S----YHK-NLLASSDYEGTVILWD
   WD 3  466-505    GQRSKVYQEHE---------------KRCWSVDFNLM----DPK-L-LASGSDDAKVKLWS
   WD 4  509-547    DNSVASIEAKA---------------N-VCCVKFS-P----TSRYH-LAFGCADHCVHYYD
   WD 5  552-589    KQPIMVFKGHR---------------KAVSYAKF--V----NGE-E-IVSASTDSQLKLWN
   WD 6  593-631    PHCLRSFKGHI---------------NEKNFVGLA-S----NGD-Y-VACGSENNSLYLYY
   WD 7  635-692    SKTLLTFKFDTVKSVLDKDKKEDDTNEFVSAVCWR-ALPDGESN-V-LIAANSQGTIKVLE

   WD40 Template    GECLRTLSGHT---------------SGVTSVSFS-P----DGK-R-LVSGSEDGTIKVWD