Input parameters:

  Query = ENSDARP00000101126 (Len=368)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000101126, Len=368):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MSCVWTGGHGTSILCAGVSCESESLVATGAEGGELTLWSHDGSPVSKLRMSADDDVTCVAFSPSAPCMLYASYGRTVAVL 80  
WD40-rpts      (_________________WD 1________________)   (_________________WD 2________________

Query       81 DSRNLKSAVAELADAGEEEINCVSVNEAGGALAAADDSGAVRIIDLQQEKVVRTLRKHDNICSSVTFRPHRPQSLVSAGL 160 
WD40-rpts      )     (_________________WD 3________________)   (_________________WD 4__________

Query      161 DMQVSLWNLPKVRPLWTYSLQDTQEEDAHPQKAGQMLAHCIDVTSCGDVFACAAEDGYVHLLRVSEDSRLRERAMFKAHS 240 
WD40-rpts      _______)                (_________________WD 5________________)         (_______

Query      241 QGASQARFINFLSQPYWLATGGNDGLVALWDISREDVLARKSKGHKRRQKGRAKKKPEAQATHTKSEEEEASSSSCSSET 320 
WD40-rpts      __________WD 6________________)(___________________WD 7___________________)(____

Query      321 AGGKNEPKLTFQHGEKVNWICPAVLKGKKSLLVTDQRPSPTVYSLDQF 368 
WD40-rpts      ____________WD 8________________)               

8 WD40-repeats found in QUERY=ENSDARP00000101126 (Len=368):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     1-39       7.36  418.72  0.00014       20.0%     43.56
  WD 2:  Seg  4    43-81       8.93  483.68  1.9e-05       25.0%     55.02
  WD 3:  Seg  8    87-125      8.47  464.51  3.4e-05       15.0%     46.13
  WD 4:  Seg 11   129-168      8.49  465.43  3.3e-05       32.5%     57.07
  WD 5:  Seg 16   185-223      7.62  429.49  0.00010       12.5%     42.46
  WD 6:  Seg 20   233-271      7.31  416.79  0.00015       22.5%     48.84
  WD 7:  Seg 24   272-315      6.66  389.95  0.00035       15.0%     51.64
  WD 8:  Seg 28   316-353      5.26  332.12  0.00208        7.5%     37.83

Multiple sequence alignment of 8 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    1-39     --M---SCVWTGGHGTS---ILC-AGVSCE-SESLVATGAEGGELTLWS
   WD 2   43-81     -SP---VSKLRMSADDD---VTC-VAFSPS-APCM-LYASYGRTVAVLD
   WD 3   87-125    -SA---VAELADAGEEE---INC-VSVNEA-GGAL-AAADDSGAVRIID
   WD 4  129-168    -EK---VVRTLRKHDNI---CSS-VTFRPHRPQSL-VSAGLDMQVSLWN
   WD 5  185-223    -EE---DAHPQKAGQML---AHC-IDVTSC-GDVF-ACAAEDGYVHLLR
   WD 6  233-271    -------RAMFKAHSQGASQARF-INFLSQ-PYWL-ATGGNDGLVALWD
   WD 7  272-315    ISREDVLARKSKGHKRR---QKGRAKKKPE-AQAT-HTKSEEEEASSSS
   WD 8  316-353    CSS-----ETAGGKNEP---KLT-FQHGEK-VNWI-CPAVLKGKKSLLV

   WD40 Template    TGE---CLRTLSGHTSG---VTS-VSFSPD-GKRL-VSGSEDGTIKVWD