Input parameters:

  Query = ENSDARP00000101125 (Len=1709)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000101125, Len=1709):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MDPGESDLDSSFPQTENPCLIVEDSQPDSVALEDDPDTSYCALLARRLSNLQPTSQSPVLELISSPTKSCCLQTGSQIDK 80  
WD40-rpts                                                                                      

Query       81 GGNTAHSDNLQNNLGSAATEHSQVFEVCSLPVSKRTVTEHMESEANSTTHCTEAHEEMSQFGLLELSESQGVFEEDDLDG 160 
WD40-rpts                                                                                      

Query      161 ANKKNVQKPTSQYVLKSSERVLSNKDGNSTGSEVTSSCPLKPQDGESRKLSIQAILHSQLPDSQEDEEDVLVSSQDDMFE 240 
WD40-rpts                                                                                      

Query      241 KETNGTKADSSVSEHLPTSTPAQSLRLLHLSGQGTYVQESLSQQSVDFVAATQDNLSQTPYIVPNSPTEKDQNCNETAES 320 
WD40-rpts                                                                                      

Query      321 PMDTSAPPEDQPQGREEEPMDTDPCPKPQPTASTPVSQNSPGFILEKRLSVPSQPEFSHDVFISTPSLEPVNNNQGTEAS 400 
WD40-rpts                                                                                      

Query      401 KRQLPHPNCTSATESTPPKPSSPEEQLNKSSSSFSQPCEAAEDFQLELSSENSCFALKTQSFIVEEDSQATQIQDQGTVV 480 
WD40-rpts                                                                                      

Query      481 TDKSNSSPKPHSQNEDKNSTDSEPSKASNSNVPDSKITSAVPEKAEDLNISQKLNNGGNQIANATPGATLSQLSVSSECV 560 
WD40-rpts                                                                                      

Query      561 SATPNLPQTSKSTDAGCPQASPLTDKPATPVPVAQHTQSQSVLTASSQKNTGNKEKHDGQNQRLSQPMLHSHSVTTDSVR 640 
WD40-rpts                                                                                      

Query      641 NVEEEEQMEEGEIKSTVKGDDTGINLALSQSQALSPEPMEEEEEKGEASIRSSSREESFSVMVLEESQRVSQEKVQKGKS 720 
WD40-rpts                                                                                      

Query      721 PPFKSSLQPVSGSIQDKPEALAKISGSQPVSSTKVSPLRLEKTKSQNTQPSSSGQQKVNSDNAANKSLSDSSGELPFHFT 800 
WD40-rpts                                                                                      

Query      801 LPKEGELIRPAVSATPPQISLLKKTPRHSTPIEMNSFSEPSVGDVTRETMANSEISVEESREGEEPVAAEQDGKLSLRMK 880 
WD40-rpts                                                                                      

Query      881 LVTPVEEGSSGPECFSLQKPSLTDEEGSVSKATAVAMAVTSPSVFSRVREVHRQTQVEDDAESSDPLIRQPSQLLSPTIT 960 
WD40-rpts                                                                                      

Query      961 NDSELSPNCPKETSNSSRASVTEAVSLNPGALEADSEALVSGLLSPAREREALDTFDRPQTPVRKKAVSQQTSVDISSTT 1040
WD40-rpts                                                                                      

Query     1041 SPPSKKAVSQQTSFDLSGPHNLSGRGEPSTPTRTQPVPSLRRHVRTIQEVRTTVTRIITDVYYEDGREVNRKVTQESEEP 1120
WD40-rpts                                                                                      

Query     1121 VVDRCVVENDISPSRTGSSMTSGDLADVSSLSSKAPSHHSSSGTSSGGLGPIRMPDFLMPPSRGAKFGRGGRPGQRGGAH 1200
WD40-rpts                                                                                      

Query     1201 APGGASSSEEEPFAQRHVQMPISPVEPSATSHSESLNTTSPDNSTGSSSFVGLRVLAKWSSNSYFYSGSITRDLGENRFR 1280
WD40-rpts                                                                                      

Query     1281 LLFDDNQECEVQGKDILLCDPIPLETEVTALTEEEYFNIGVVKGHKTQGSEFLYCVEKDGQSSYYSRTSVILSMEQGSRL 1360
WD40-rpts                                                                                      

Query     1361 REQYGLGPYEPSTPQTMACDISLDNLVEGKRRRRGNCSGAGTPTRSSSNSPRNPGPSGKRKLISCTEEERTPPKRGRRGA 1440
WD40-rpts                                                                                      

Query     1441 GARVGRRIAACNTSGSGVDLPPDPNDLVATHGPLPENSSLFMGFVFLLTASSEGDRYSSHQSSDEDEEYVQRAPYNKHYT 1520
WD40-rpts                                                                                      

Query     1521 VSQLEAGGGMILLDFNEEQCKAAYQSLLIADQHCRTRKYLLCVAGGVPCVSQMWVRDCCQEKKLLNYRNYLLPAGLGPGG 1600
WD40-rpts                            (_____________________________WD 1________________________

Query     1601 RIVEWHPRSNPFKALKVMLIAEDRVDLWTSLLSMGGAEKVYRQESQNISDIPDVKFDVAVTSSACTSEEVKRVASDMPVV 1680
WD40-rpts      _____)                                                                          

Query     1681 SLEWLIQSLICGKCLNFDSNSEFCHNTST 1709
WD40-rpts                                   

1 WD40-repeats found in QUERY=ENSDARP00000101125 (Len=1709):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg 13  1543-1606     3.30  251.00  0.02550       27.5%      7.12

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1 1543-1606   AYQSLLIADQHCRTRKYLLCVAGGVPCVSQMWVRDCCQEKKLLNYRNYLLPAGLGPGGRIVEWH

   WD40 Template    TGECLRTLSGHT----------SGVTSVS-------------FSPDGKRLVSG-SEDGTIKVWD