Input parameters:

  Query = ENSDARP00000100714 (Len=1424)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000100714, Len=1424):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 IKLIVHNVDLLKQKTQQQNDMASLSCSMKPYPFNRFNTAHRYRENTTLDVTETGPIDLIQPCHEFKGFTNTTEEDRMKKY 80  
WD40-rpts                                                                                      

Query       81 TYEVIRFAAACMNSRTNGTIHFGVADKPHGQILGVNIPKTDDFDVQQSHAIERHFKWEKNVQIAKMCIKPPRFVEVLKVD 160 
WD40-rpts                                                                                      

Query      161 MMSSGKYVIEVDIEPSSNVCQDLHFNTYDLEKNNKNLKNKDKMSEPKKNNESKSFFIRDGSSSKNIITSDSLKEVENYLA 240 
WD40-rpts                                                                                      

Query      241 NMAHLSQLRKEAEEKHLSVVKTSVQGSKLCEMITGGTQSLDRSHFKSYIVVANKSHPVQLENLRFLLHMDLVAVLDFDPE 320 
WD40-rpts                                                                                      

Query      321 SAEHGLNKLFEERKTNVHSPTQYKITGAVEDIADKLKLTKNTSWVFCNGGINNESPSDADKWLIEKGSSVHDVISFLCRR 400 
WD40-rpts                                                                                      

Query      401 DVLPHKKFLTVFLLLNQVNDRKDPLLETLKFFLQELKGENQILCITDNKTSYTYWKDLIDVADISKRCIYELSFAEVNGT 480 
WD40-rpts                                                                                   (__

Query      481 VLSLWSENRKSSRFLPCGGGSNVVLSKKIEESLEMLSILCVNQCEGGNEDKQHHEKIFYKGGKVSWWNFYFSEQPGSMPF 560 
WD40-rpts      _______________________________WD 1________________________________)            

Query      561 IKRDKFDYIVNTIIPDICSQKTVCEFFNIFHLPGCGGTTLAMHVLWTLKKQFRCAVLKDSTGDYTAAAEQVVQLLTYETN 640 
WD40-rpts                                                                                      

Query      641 EQPKRLPVLLLIDDFQDISDVKKLKLQIEEECQKQNISSKSPQVIIVNCMRVETHELTDRTDNSVFIGNTLSKKEQELFE 720 
WD40-rpts                                                                                      

Query      721 EKLKEFRKTKMNTKTFYGFMILMTNFSSEYIQSVVKKTLKDFNFEHKHAQLFAVLVLLHVYSSNAVLSVSTCEEFLGLQP 800 
WD40-rpts                                                                                      

Query      801 KVAIRLYKVEDEFERFSNLLTRCKVNSKVNFEGVRVIHSCIAKQCLQELSASHGVTKAEITNILLTTELFYEYTLGKQKL 880 
WD40-rpts                                                                                      

Query      881 RQDVHNMLVKRQYSAEVEGSLFSPLIQDIMKETPGTQQIILHNAEKCLKKDAYISQLLARYYYIKKQDFLQAMYWAKKAK 960 
WD40-rpts                                                                                      

Query      961 SQLTENSYICDTEFQVRMHELKHAVYKDKDNPIKPENLDEYLTLAQKASEACKETQKTADKEAKHQLDKRRVNRGYKNYQ 1040
WD40-rpts                                                                                      

Query     1041 TYNTAGHLSHLQTAVTVTEMLQKTPLYAVKDTRNNCLSQVLMGKITIEDLPSKNPRLKPYIPVLLKHKRYLLQLKERMKK 1120
WD40-rpts                                                                                      

Query     1121 HFIFLDNFLVNLVPFFAEKDKQKELTMHRMSKYFQQYTALFCEINWSELVNNKHVNSMAKIEQTRQCLEKNKGDSYTGLL 1200
WD40-rpts                                                                                      

Query     1201 EHLYQDNSASTLEEIIQQYRFIARLQRDQPLMDMVNFIYANVILANIKPESQFIMPYPNLFKLLNQINKQPAPFSEILPL 1280
WD40-rpts                                                                                      

Query     1281 HYITILLLSQEGHGALPAILSQMKASYFNELNPVSNGKRAAVHFYLGKYEGYAGLISQRDINRCLAPEQDIATQWDDESI 1360
WD40-rpts                                                                                      

Query     1361 WKKVRDSEKLHRVSGEIRDGFISVAGIMVDPMFRSQIYKESGTRVNCFIGFSMNGPVALDIDFE 1424
WD40-rpts                                                                      

1 WD40-repeats found in QUERY=ENSDARP00000100714 (Len=1424):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg 17   478-548      2.85  232.34  0.04507       17.5%     31.83

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  478-548    NGTVLSLWSENRKSSRFLPCGGGSNVVLSKKIEESLEMLSILCVNQCEGGNEDKQHHEKIFYKGGKVSWWN

   WD40 Template    TGECLRTLSGHTSGVTSVSFSPDGKRLVSG----------------SEDGT---------------IKVWD