Input parameters:

  Query = ENSDARP00000099718 (Len=1112)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000099718, Len=1112):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MPCERKPMRYGHSEGHTDVCFDDQGKCIVTCGSDGDVRIWESLDDDDPKSINVGEKVYSVALKNGKLVTAVSNNTVQIHT 80  
WD40-rpts       (_________________WD 1_________________)                                       

Query       81 FPDGEPDGILTRFTTNANHVTFNNSGSRVAAGSSDFLVKMVEVADSSQQKTLRGHDAPVLSVALDPSDEFLASSSCDGSV 160 
WD40-rpts         (_________________WD 2________________)   (_________________WD 3_____________

Query      161 AVWSIESQTQVAQWKVLQKSSDVTNAKSLCRLAWQPRSGKLIAVPVDLTIQLYERNTWTHVSTLSDDLITQVVNVVVWSP 240 
WD40-rpts      ___)            (________________WD 4________________)   (__________________WD 5

Query      241 CGKFLAAGTVGGNLLIWDVEAKLCIDRQKHEKGFTVCGMAWHPSGGRIAYTDTEGCLGLLEGVSSSSSTVQSSKATAAKE 320 
WD40-rpts      _________________)   (_________________WD 6_________________)(_________________W

Query      321 ANDYDDLFDEDDDRMLDEDMSDSRSPVKKPIMEDEDDDDDDDLMPATGRPRNRGSFLDDDDNSQDPSSVKLDGLPEEGGS 400 
WD40-rpts      D 7________________)                                                            

Query      401 SAVLPAVAPVVSRPVYDGPMPTQPQRAFQPGSTPAHLMHRFMMWNSVGIVRGYNDDQDNAIDVEFHDTAIHHAMHLTNTL 480 
WD40-rpts                                                                                      

Query      481 GHTMADLSQEAVLLACEGTDELASKIQCLHFSCWDTHKDWMVDLPKGEDVRALCLGQGWAAVATSALMVRLFSIGGVQKE 560 
WD40-rpts                                                                                      

Query      561 IFSLPGAVVCMAGHGEQLLIAYHRGTGFDGEQALGVQLLQLGRKKRQVIHGEPLPLSRKSYLAWMGFSAEGTPCCVDSEG 640 
WD40-rpts                                                                                      

Query      641 VVRLLNRTLGNTWTPVCNTRETCKSKSDHYWVVGVHENPQQLRCIPCKGARFPPTLPRPAVAVLPFNMPYCQTTTEKGQM 720 
WD40-rpts                                                                                      

Query      721 EEQYWRSMLFHNHYGFLSSSGYEIDSESQAQAEKEQQELLMKMFALSCKLEREFRCVELAELMTHSVVTLAIRYASRSRR 800 
WD40-rpts                                                                                      

Query      801 MALAQRLSELALEKANQLQEEEQEDEEPAYQREYRESNQMNSRQAQQENGCEEEEVEEEEYPQEEQMDAEESTETRKKFL 880 
WD40-rpts                                                                                      

Query      881 NPFKKGGKSPEKPSPKPVSREGRVNPFKVSGAGKSSGSPAGQPRTTNVLDSMTMSRKPAAFSGLSKQSKAPVLKPLAPKP 960 
WD40-rpts                                                                                      

Query      961 KSKTQATLLQMSASKGNSKKLEDSQSEAEKVKPAPVAATPPVLKENTENKKPKTGFQLWLEENRKSILADNPDFEEMDVI 1040
WD40-rpts                                                                                      

Query     1041 KEGMGRFRTLSAEERLNWTEKAKGDSDPKKRKREDEDEEKAAEQMESDEASAKKKKPLDSSAKLSAFAFNKE 1112
WD40-rpts                                                                              

7 WD40-repeats found in QUERY=ENSDARP00000099718 (Len=1112):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     2-41       7.98  444.14  6.4e-05       32.5%     45.32
  WD 2:  Seg  7    84-122      7.17  410.71  0.00018       30.0%     54.85
  WD 3:  Seg 11   126-164      8.70  473.98  2.5e-05       37.5%     56.50
  WD 4:  Seg 16   177-214      4.98  320.50  0.00298       12.5%     44.53
  WD 5:  Seg 19   218-258      6.96  402.27  0.00024       37.5%     58.85
  WD 6:  Seg 23   262-301      4.59  304.26  0.00493       15.0%     56.34
  WD 7:  Seg 27   302-340      3.21  247.16  0.02869       15.0%     12.54

Multiple sequence alignment of 7 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    2-41     PCERKPMRYGH--SE-GHTDVCFDDQGKCIVTCGSDGDVRIWE
   WD 2   84-122    -GEPDGILTRF--TT-NANHVTFNNSGSRVAAGSSDFLVKMVE
   WD 3  126-164    -SSQQKTLRGH--DA-PVLSVALDPSDEFLASSSCDGSVAVWS
   WD 4  177-214    LQKS--SDVTN--AK-SLCRLAWQPRSGKLIAVPVDLTIQLYE
   WD 5  218-258    -WTHVSTLSDDLITQ-VVNVVVWSPCGKFLAAGTVGGNLLIWD
   WD 6  262-301    -KLCIDRQKHE--KGFTVCGMAWHPSGGRIAYTDTEGCLGLLE
   WD 7  302-340    -GVSSSSSTVQ--SS-KATAAKEANDYDDLFDEDDDRMLDEDM

   WD40 Template    TGECLRTLSGH--TS-GVTSVSFSPDGKRLVSGSEDGTIKVWD