Input parameters:

  Query = ENSDARP00000099465 (Len=1189)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000099465, Len=1189):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 SSSSCLLPRALTLASPPLFHHSNGAGPACSATGYRKAEDEMSGTTSQADPVDATARTVLLNRAQTTKYCDNHVSTAKYGI 80  
WD40-rpts                                                                                      

Query       81 LTFLPRFLYEQIRRAANAFFLFIALMQQIPDVSPTGRYTTLVPLIFILTVAGIKEIIEDYKRHKADNTVNKKKTTVLRNG 160 
WD40-rpts                                                                                      

Query      161 AWQTIIWKQVAVGDIVKVTNGQHLPADMVIVSSSEPQAMCYTETSNLDGETNLKIRQGLSLTASFQSLEDLIALSGRLEC 240 
WD40-rpts                                                                                      

Query      241 EGPNRHLYDFTGTLRLDNHNPAPLGPDQVLLRGAQLRNTQWVVGIVVYTGHDSKLMQNSTKAPLKRSNVERVTNMQILVL 320 
WD40-rpts                                                                                      

Query      321 FGILLVMALVSSIGAAIWNKQHTDEACWYLSRAGDISLNFAYNLLTFIILYNNLIPISLLVTLEVVKFTQALFINWDVEM 400 
WD40-rpts                                                                                      

Query      401 YYAETDTPAMARTSNLNEELGQVKYLFSDKTGTLTCNVMHFKKCTIAGITYGHFPDLDCDRSMEDFSHLPSTSHNSTEFD 480 
WD40-rpts                                                                                      

Query      481 DPALIQNIEKNHPTSPQICEFLTMMAVCHTVVPEREDNQIIYQASSPDEGALVKGAKSLGFVFTARTPHSVIIEARGKEQ 560 
WD40-rpts                                                                                      

Query      561 TYELLNVLEFSSNRKRMSVIVRTPTGNLRLYCKGADNVIFERLNVTSQYKELTVAHLEQFATEACAGLRTLCFAYVDLEE 640 
WD40-rpts                            (_________________________________________________________

Query      641 GAYLEWLKEYNRISTVLKDRAQKLEECYELIEKNLLLLGATAIEDRLQAGVPETIATLMRADIKIWVLTGDKQETAINIG 720 
WD40-rpts      ___WD 1___________________________________________________________)             

Query      721 YSCRLVSHGMSLIIVNEDSLDATRATLTAHCSSLGDSLRKENELALIIDGQTLKYALSFEVRQAFLDLALSCKAVICCRV 800 
WD40-rpts                                                                                      

Query      801 SPLQKSEIVDMVKKHVKAITLAIGDGANDVGMIQTAHVGVGISGNEGMQATNSSDYSFSYLEKLLLVHGAWSYNRVTKCI 880 
WD40-rpts                                                                                      

Query      881 LYCFYKNVVLYIIELWFAFVNGFSGQILFERWCIGLYNVIFTALPPFTLGIFDRPCSQQNMIRFPQLYRITQNAEGFNTK 960 
WD40-rpts                                                                                      

Query      961 VFWGHCINALIHSIILFWFPLKALEHDTPFDNGNSVDYLFVGNIVYTVQYVVVTVCLKAGMETTAWTRFSHLAVWGSMVL 1040
WD40-rpts                                                                                      

Query     1041 WMLFFAVYSAIWPTIPIAPDMLGQAGRVMQCWSFWLGLILVPTACLLKDVVWNAGRRTVRKTLLEEVQELEARAVDPGAA 1120
WD40-rpts                                                                                      

Query     1121 VLRDASGRSLNERAHLLTRVFRKTPSSVGRSNSVQQTVSHGYAFSQEEHGVVSQSQVVRSYDTTRQRPS 1189
WD40-rpts                                                                           

1 WD40-repeats found in QUERY=ENSDARP00000099465 (Len=1189):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg 21   583-707      3.18  246.00  0.02973       30.0%     21.77

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  583-707    TPTGNLRLYCKGADNVIFERLNVTSQYKELTVAHLEQFATEACAGLRTLCFAYVDLEEGAYLEWLKEYNRISTVLKDRAQKLEECYELIEKNLLLLGATAIEDRLQAGVPETIATLMRADIKIWV

   WD40 Template    TGECLRTLSGHTS--------GVTS-----------------------VSFSPDGKR------------------------------------LVSGS-------EDG-----------TIKVWD