Input parameters:
Query = ENSDARP00000098359 (Len=118)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSDARP00000098359, Len=118):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MDFQVRSVMMDSTPVALQLWDTAGQERFHSLTQQYFRKADGIIAMYDVTQQSSFTAVRHWLDQVQQYRAEFYECSAKTGH 80
WD40-rpts (_____________________WD 1____________________)
Query 81 QVEEAMTHLTRLLASQQDKQCESALRLDTSANGGRCCK 118
WD40-rpts
1 WD40-repeats found in QUERY=ENSDARP00000098359 (Len=118):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 1 1-47 2.87 233.01 0.04416 17.5% 32.89
Multiple sequence alignment of 1 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 1-47 MDFQVRSVMMDSTPVALQLWDTAGQERFHSLTQQYFRKADGIIAMYD
WD40 Template TGECLRTLSGHTSGVTSVSFSPDGKRLVSGS-------EDGTIKVWD