Input parameters:

  Query = ENSDARP00000097992 (Len=1564)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000097992, Len=1564):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 VCQNSSFLQREDPDLPVCVERTVLVWLPLAFLWICSPFHFRSFCQKSAKAPASALYYCKQQVVAGLLLLTAVAELAVTLG 80  
WD40-rpts                                                                                      

Query       81 EDFGPSSDEDAQKNPAVLYTNPVLFAVSWIVVMLCQESMRHRLMCVDSGSLFMFWLLQVVCAVFQFQTLLRVCVSQGISD 160 
WD40-rpts                                                                                      

Query      161 VPRFCLFYISYGLQIIALVLSAIADVSPEAKKVAETNPEAKATFLSRITFNWFNSMVWKGFKRPLVQEDMWDLNKNDSTH 240 
WD40-rpts                                                                                      

Query      241 FICQTFEDVMAKELKKARNNLQKKKSKKRKTVDAEGQNGLAKGVSQDVLVMLSCNKQQTAKKTQKLEYKDALDSDSDYPQ 320 
WD40-rpts                                                                                      

Query      321 SWLVTTIVKSFKGVLLESALFKLLQDLLSFASPQLLKLMIAFTQNKDSYAWTGYLYAVLLVLVAFVQSVVLQQYFQRCFI 400 
WD40-rpts                                                                                      

Query      401 LGMKVRTAIMAAVYKKALVVSNDSRKESTAGEIVNLMSADAQRFNDVTNFIHLLWSCPLQIALSIAFLWIELGPSVLSGL 480 
WD40-rpts                                                                                      

Query      481 LVMVLMVPINGWLATKSRQFQMQNMKFKDSRMKIVNDLLNGIKILKYYAWETSFEAQVQEIREKELKVMRKFAYLSSVST 560 
WD40-rpts                                                                                      

Query      561 FIFSCAPALVSLATFAVFVSVSPDNILDAEKAFTSISLFNILRFPLAMLPQLISIMVQTSVSKKRLEKFLSGDDLDTTTV 640 
WD40-rpts                                                                                      

Query      641 THDSSITAAVSMTNGTYAWERDTEPVLKQVSLDIKPGRLVAVVGAVGSGKTSLVSALLGELHSIKGNININGSVAYVPQQ 720 
WD40-rpts                                                                                      

Query      721 AWIQNATLKDNILFGSSVDEERYQSVIKACALGPDLDLLPGRDQTEIGEKGINLSGGQKQRVSLARAVYSSADVYLLDDP 800 
WD40-rpts                                                                                      

Query      801 LSAVDSHVGKHLFEKVIGPNGLLRDKTRILVTHGISFLPYVDEIVVLVHGVVSEIGSYESLRASKGAFSEFLETYGKDES 880 
WD40-rpts                                                                                      

Query      881 NKDNDKKETAAAAQTPVYEEIETLPEGLETQADGSPEDIVSSTLKRENSLRHSQRHSKRNGSVKVRKNSSLRAQKDPEDK 960 
WD40-rpts                                                                                      

Query      961 KGQRLIEKEMMETGRVKFSVYLQYLSAMGWWYVGFSFVFYFIQNVAVIGQNLWLSDWTDDSIEYFNQTYPNHIRDTRIGV 1040
WD40-rpts                                                                                      

Query     1041 FGALGLAQGFLVFFGTILLADGSISASRTLHTSLLTNILKVPMMFFDTTPSGRIVNRFAKDIFTVDEMIPMSFRSWILCL 1120
WD40-rpts                                                                                      

Query     1121 LGVLGTLFVICLATPIFTAVVVPMAVVYYFVQRFYVATSRQLRRLDSVSRSPIYSHFGETVSGLSVIRAYGHQDRFLKHN 1200
WD40-rpts                                                                                      

Query     1201 EHTIDQNLKSVYPWIVSNRWLAMRLESLGNLVVFFAALFAVISRDSLNSGLVGLSISYALNVTQTLNWLVRMTSELETNI 1280
WD40-rpts                                                                                      

Query     1281 VAVERVREYAEIQNEAPWVTSVRPPDDWPSAGNIRFEDYKVRYRPELELVLHGVTCDIQSTEKIGIVGRTGAGKSSLTNC 1360
WD40-rpts                                                 (________________________WD 1________

Query     1361 LFRIVEAADGRILIDDIDIATLGLHDLRSRLTIIPQDPVLFSGTLRMNLDPFQTFSDAEIWSVLELAHLKEYVRGLPTGL 1440
WD40-rpts      _______________)                                                                

Query     1441 EHEVSEGGENLSALGQRQLLCLARALLRKSRILILDEATAAVDLETDDLIQSTIRREFSHCTVLTIAHRLNTILDSSRVM 1520
WD40-rpts                                                                                      

Query     1521 VLDSGKIVEFDSPNELLSKPGHFSSMAEDAGIRREEEQSQSYVF 1564
WD40-rpts                                                  

1 WD40-repeats found in QUERY=ENSDARP00000097992 (Len=1564):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg 11  1324-1376     2.83  231.68  0.04598       27.5%     -18.92

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1 1324-1376   RPELELVLHGVTCDIQSTEKIGIVGRTGAGKSSLTNCLFRIVEAADGRILIDD

   WD40 Template    TGECLRTLSGHTSGVTSVSFSPDGKRLVSG-------------SEDGTIKVWD