Input parameters:

  Query = ENSDARP00000097750 (Len=988)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000097750, Len=988):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MSCSGNLIWDVRKRTIGCTDPYSIRTNYLGRREFVQRLKLEAVLNVHDGCVNTISWNDTGEYILSGSDDTNLVITNPYNR 80  
WD40-rpts                                           (_________________WD 1________________)(___

Query       81 KVKTTIRSGHRANIFSAKFMPHTNDQQIVSCSGDGIIFYTHTEKSQEINRQCQFTCHYGTAYEIMTVPNDPYTFLSCGED 160 
WD40-rpts      _________________WD 2___________________)(____________________WD 3______________

Query      161 GTVRWFDLRMKTSCTKEDCKDDILINCRRAATSISICPLVPYYLAVGCSDSSVRIYDRRMLGTRATGNYMGRGTTGMCVR 240 
WD40-rpts      ______)                (______________WD 4______________)                       

Query      241 FVPAHLSTKSCRVTSLCYSEDGQEVLVSYSSDYIYLFDPKDDQARELKGPSEERREELRQPPVKRLRLRGDWSDTGPRAR 320 
WD40-rpts        (_______________WD 5_______________)                               (__________

Query      321 PESERERDGEQSPNVSLMQRMSDMLSRWFEEASEAQSSRARPQTRPRGTAAQAEGTSSETTAQAQVSSGVAAEGVMELET 400 
WD40-rpts      __WD 6____________)                                                             

Query      401 PTINPLPTPPAPAPPSEPLPKSVSSSSSGSSSTVTAPPPSSSSSMESATSSSLLSSPDTEQKSQGEVTPTPSATPTPSAT 480 
WD40-rpts                                                                                      

Query      481 PTASREAALSEYGPHRLPVSLVCRRLQRLLLLSDPPGQGRRTMPNVPMTSSSESSAQQATAAADSPSSVVNKQLRSMTLE 560 
WD40-rpts                                                                                      

Query      561 EEQGVKSSGEAAVRVIGDQSTGVTEASPETTESVPSTSAPSLGTSPGNISVSTPSGSGRSGTAEPVLSLHYSTEGTTTST 640 
WD40-rpts                                                                                      

Query      641 IKLDFTDEWSSPASGAKSSSGGQKSGELEESQSREEPPGHKSSSSSKSEPTPDGGQTASSSTEKPGISSKNSSASAPAPP 720 
WD40-rpts                                                                                      

Query      721 GDPSTTDTGHPSEELQTAASEQLSEQCRTSENAGTASQGSTQPSRNNQDSDDSDDDPILIPSARYRGGQGQRFSYRGSAV 800 
WD40-rpts                                                                                      

Query      801 GDRMIRRSAAARIQELFRRRKERREMEESETQNIRRPSVKMMYKGHRNSRTMIKESCFWGSNFVMSGSDCGHIFIWDRHT 880 
WD40-rpts                                          (__________________WD 7_________________)   

Query      881 GEHLMLLEADNHVVNCLQPHPYDPILASSGIDYDIKLWSPLEQSPSFNRVLADEVIARNELMLEETRNTITVPASFMLRM 960 
WD40-rpts      (_________________WD 8________________)                                         

Query      961 LASLNHIRTDRVEGDRSEGSGQENEDEQ 988 
WD40-rpts                                  

8 WD40-repeats found in QUERY=ENSDARP00000097750 (Len=988):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1    38-76       8.88  481.37  2.0e-05       22.5%     43.68
  WD 2:  Seg  5    77-121      6.11  367.25  0.00070       30.0%     48.12
  WD 3:  Seg  9   122-167      5.72  351.11  0.00115       22.5%     46.64
  WD 4:  Seg 13   184-217      4.86  315.61  0.00347       22.5%     45.61
  WD 5:  Seg 17   243-278      5.96  360.84  0.00085       25.0%     44.42
  WD 6:  Seg 21   310-339      3.21  247.13  0.02872       10.0%     -0.11
  WD 7:  Seg 22   837-877      4.33  293.48  0.00689       27.5%     35.70
  WD 8:  Seg 26   881-919      7.53  425.68  0.00011       30.0%     46.09

Multiple sequence alignment of 8 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   38-76     -LK---LEA-----VLNVHDGCVNTISWND--TGE-YILSGSDDTNLVITN
   WD 2   77-121    PYNRKVKTT-----IRSGHRANIFSAKFMPHTNDQ-QIVSCSGDGIIFYTH
   WD 3  122-167    TEK---SQEINRQCQFTCHYGTAYEIMTVP--NDPYTFLSCGEDGTVRWFD
   WD 4  184-217    ---------------LINCRRAATSISICP-LVPY-YLAVGCSDSSVRIYD
   WD 5  243-278    PAH------------LSTKSCRVTSLCYSE--DGQ-EVLVSYSSDYIYLFD
   WD 6  310-339    ------------------GDWSDTGPRARP--ESE-RERDGEQSPNVSLMQ
   WD 7  837-877    -PS---VKM-----MYKGHRNSRTMIKESCFWGSN-FVMSGSDCGHIFIWD
   WD 8  881-919    -GE---HLM-----LLEADNHVVNCLQPHP--YDP-ILASSGIDYDIKLWS

   WD40 Template    TGE---CLR-----TLSGHTSGVTSVSFSP--DGK-RLVSGSEDGTIKVWD