Input parameters:

  Query = ENSDARP00000097707 (Len=692)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000097707, Len=692):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MALCNGDSKLDIVGEPKDGLCSYEGAVVILDAGAQYGKVIDRRVREMFVQSEILPLETPAFAIREQGFRAIIISGGPNSV 80  
WD40-rpts                                                                                      

Query       81 YAEDAPWFDPAIFTIGKPVLGICYGMQMMNKVFGGTVHRKSVREDGVFNIALDNSCSLFRGLQKEEHVLLTHGDSVDKVA 160 
WD40-rpts                                                                                      

Query      161 DGFKIVAQSGNIVAGIANEQKKLYGTQFHPEVDLTERGMDMLRNFLFEIAGCSSNFTVQNRQMSCIREIREKVDKSKVLV 240 
WD40-rpts                        (___________________________________________WD 1______________

Query      241 LLSGGVDSTVCTALLNKALNQEQVIAVHIDNGFMRKRESQSVEEALTKLGIKLKVVNAAHTFYNGTTTLPISEEDRTPRK 320 
WD40-rpts      ____________________________)                                                   

Query      321 RISKTLNMTTNPEEKRKIIGDTFVKVANEVIGEMNLKPEDVYLAQGTLRPDLIESASHLASGKAEVIKTHHNDTELIRKL 400 
WD40-rpts                                                                                      

Query      401 RDEGKVIEPLKDFHKDEVRALGRELGLPEEIVSRHPFPGPGLAIRVICADEPYVCKDFAETNNILKIITDFSASVKKPHT 480 
WD40-rpts                                                                                      

Query      481 LLQRVKSCISDEEEEKLMQITSLHSLNAFLLPIKTVGVQGDSRSYSYVCGVSSKEAPHWDSLMFLARLIPRICHSINRVV 560 
WD40-rpts                                                                                      

Query      561 YVFGSHVKEPPTDITPTFLTTGVLSTLRQADFVAHSILRESGYSSKISQMPVILTPLHFDRDPLQKQPSCRRSVVIRTFI 640 
WD40-rpts                                                                                      

Query      641 TSDFMTGIAATPDNQIPEEVVLKMVNEIKKIPGISRVMYDLTSKPPGTTEWE 692 
WD40-rpts                                                          

1 WD40-repeats found in QUERY=ENSDARP00000097707 (Len=692):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  9   179-269      3.08  241.97  0.03362       20.0%     11.28

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  179-269    EQKKLYGTQFHPEVDLTERGMDMLRNFLFEIAGCSSNFTVQNRQMSCIREIREKVDKSKVLVLLSGGVDSTVCTALLNKALNQEQVIAVHI

   WD40 Template    TGECLRTLSGHTSGVTS------------------VSFS------------------PDGKRLVSGSE---------------DGTIKVWD