Input parameters:

  Query = ENSDARP00000097653 (Len=1627)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000097653, Len=1627):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MSTPDPPMGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHGMMGPSPGPPSSGHPLPPQGPSGYPQDNMHQMHKPMEGMH 80  
WD40-rpts                                                                                      

Query       81 EKGIPEDQRYGQMKGMGMRQGGHSGMGPPPSPMDQHSQGYPSPLGGSDHAPSPVPANGPPSGPMMPSGPGAMPMEGGDPQ 160 
WD40-rpts                                                                                      

Query      161 AMAQQNRSGGAGGVAGPGPSGGPPNAGGPGGAGGPTPFNQNQLHQLRAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQ 240 
WD40-rpts                                                                                      

Query      241 QGMPNMPPASGQGAGPPGPGVPGPGGPNYNRPHGMVGPNMPPPGPSGVPPGLQGQPTNGPPKPWPEGPMVNAAAPASAPQ 320 
WD40-rpts                                                                                      

Query      321 KLIPPQPTGRPSPAPPSVPPAASPVMPPQTQSPGQPAQPPMVLHQKQNRITPIQKPRGLDPVEILQEREYRLQARIAHRI 400 
WD40-rpts                                                                                      

Query      401 QELENLPGSLAGDLRTKANIELKALRLLNFQRQLRQEVVVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKI 480 
WD40-rpts                                                                                      

Query      481 EQERKRRQKHQEYLNSILQHAKDFKEYHRSITAKMQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRKLI 560 
WD40-rpts                                                                                      

Query      561 DQKKDKRLAYLLQQTDEYVANLTELVRAHKAAQALKDKKKKKKKKKPENAEGGAPALGPDGEPLDETSQMSDLPVKVIHV 640 
WD40-rpts                                                                                      

Query      641 DSGKILTGMDAPKAGQLDTWLEMNPGYEVAPRSDSEDSGSDEEEDDEEEPQPSQAPTEEKKVIPDPDSEDVSEVDARHII 720 
WD40-rpts                                                                                      

Query      721 EHAKQDVDDEYGNSAFIRGLQSYYAVAHAVTEKVEKQSSLLVNGQLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQ 800 
WD40-rpts                                                                                      

Query      801 TIALITYLMEFKRLNGPFLIIVPLSTLSNWVYEFDKWAPSVVKVSYKGSPAARRAFLPILRSGKFNVLVTTYEYIIKDKQ 880 
WD40-rpts                                                                                      

Query      881 VLAKLRWKYMIVDEGHRMKNHHCKLTQVLNTHYLAPRRVLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFA 960 
WD40-rpts                                                                                      

Query      961 MTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKG 1040
WD40-rpts                                                                                      

Query     1041 KGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGSDLYRASGKFELLDRILPKLRATNHKVLLFCQMTTL 1120
WD40-rpts                                                                                      

Query     1121 MTIMEDYFAYRNFKYLRLDGTTKAEDRGMLLKNFNDPSHQYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQD 1200
WD40-rpts                (__________________________WD 1_________________________)             

Query     1201 RAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDEEEDEVPDDET 1280
WD40-rpts                                                                                      

Query     1281 VNQMIARSEEEFDHFMRMDLDRRREEARNPKRRPRLMEEDELPTWIMKDDAEVERLTCEEEEEKMFGRGSRQRKEVDYSD 1360
WD40-rpts                                                                                      

Query     1361 SLTEKQWLKAIEEGTLDEIEEEVRHKKTTRKRKRDRDLDLPGPATPSSSGRSRDKDDDGKKQKKRGRPPAEKLSPNPPSL 1440
WD40-rpts                                                                                      

Query     1441 TKKMKKTVDAVIKYKDGNGRQLSEVFIQLPSRKELPEYYELIRKPVDFRKIKERIRSHKYRSLNDLEKDVMLLCQNAQTF 1520
WD40-rpts                                                                                      

Query     1521 NLEGSLIYEDSIVLQSVFTSVRQKIEKEEEESEGDDSEEEEDDVDEGSESESRSVKVKIKLSRKDKAERGKGRRRTGRSS 1600
WD40-rpts                                                                                      

Query     1601 RPKPVVSDDDSEEDQEEEHSASGSEED 1627
WD40-rpts                                 

1 WD40-repeats found in QUERY=ENSDARP00000097653 (Len=1627):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg 10  1131-1187     2.92  235.27  0.04124       25.0%     32.55

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1 1131-1187   RNFKYLRLDGTTKAEDRGMLLKNFNDPSHQYFIFLLSTRAGGLGLNLQSAD-TVIIFD

   WD40 Template    TGECLRTLSGHTS------------------GVTSVSFSPDGKRLVSGSEDGTIKVWD