Input parameters:

  Query = ENSDARP00000096330 (Len=811)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000096330, Len=811):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MFPQNRPPAPLQPPPGSSASAAAAAAAAAAASGSTQPLKLTYPETLDRIKEEFQFLQTQYHSLKLECEKLATEKTEIQRH 80  
WD40-rpts                                                                                      

Query       81 YVMYYEMSYGLNIEMHKQTEIAKRLNVICAQLIPFLSQEHQQQVVQAMERAKQVTMGELNASIGVRGLPPLPPTQQLQAQ 160 
WD40-rpts                                                                                      

Query      161 HLSQHAAQGLPMAPHPSGLPHPGLALGGGSGLLALSGALGAQLASKDERAHLEAVAAAAAAEHHRDWPRGRLPALPMIPI 240 
WD40-rpts                                                                                      

Query      241 DREPGPSSLSNGDKGRSSDYLSNGKKRKADEKEFMTDYGSDAEKSDDNLVVDEDPSSPRSVQSYSSRENGLDKLPPSRKE 320 
WD40-rpts                                                                                      

Query      321 PLPQASPTSLASSSSAASPSRSKEPPPREKSSTPGMKPGTPMSQESSTPGPSVPPQFRPVPGKPGVDPLALGLRNPLAVQ 400 
WD40-rpts                                                                                      

Query      401 GAYPPGAFGLPPPGVNGELAGAAGYGAGLHLVSPQMNGSAAAAAAAAAAAAGYGRSPVVGYESPHPHMRVPGLPGSLQSA 480 
WD40-rpts                                                                                      

Query      481 ATGKPAYSFHVSADGQMQPVPFPPDALLGPGIPRHARQIHTLSHGEVVCAVTISTSTRHVYTGGKGCVKVWDISQPGSKS 560 
WD40-rpts                                              (_____________WD 1_____________)(_______

Query      561 PMAQLDCLNRDNYIRSCKLLPDGRTLIVGGEASTLSIWDLATPTPRIKAELTSSAPACYALAISPDNKVCFSCCSDGNIV 640 
WD40-rpts      ______________WD 2____________________)     (_________________WD 3______________

Query      641 VWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRCWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESS 720 
WD40-rpts      __)   (_________________WD 4________________)(__________________WD 5____________

Query      721 NVEVLHVSKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGSSIFQSKESSSVLSCDISPDDQFIVTGSG 800 
WD40-rpts      _____)(__________________WD 6_________________)(__________________WD 7__________

Query      801 DKKATVYEVIY 811 
WD40-rpts      _______)   

7 WD40-repeats found in QUERY=ENSDARP00000096330 (Len=811):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  6   521-552      5.95  360.39  0.00087       27.5%     44.89
  WD 2:  Seg  9   553-599      7.54  425.97  0.00011       25.0%     48.51
  WD 3:  Seg 12   605-643      8.34  459.25  4.0e-05       30.0%     53.73
  WD 4:  Seg 16   647-685      9.91  524.19  5.4e-06       35.0%     52.90
  WD 5:  Seg 20   686-726      6.94  401.23  0.00024       25.0%     52.38
  WD 6:  Seg 24   727-767      8.27  456.23  4.4e-05       30.0%     53.90
  WD 7:  Seg 28   768-808      7.62  429.40  0.00010       32.5%     53.68

Multiple sequence alignment of 7 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  521-552    TL---------------SHGEVVCAVTISTSTRHVYTGG-KGCVKVWD
   WD 2  553-599    ISQPGSKSPMAQLDCL-NRDNYIRSCKLLPDGRTLIVGGEASTLSIWD
   WD 3  605-643    -PR-------IKAELT-SSAPACYALAISPDNKVCFSCCSDGNIVVWD
   WD 4  647-685    -QT-------LVRQFQ-GHTDGASCIDISNDGTKLWTGGLDNTVRCWD
   WD 5  686-726    LRE-------GRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLH
   WD 6  727-767    VSK------PDKYQLH-LHESCVLSLKFAYCGKWFVSTGKDNLLNAWR
   WD 7  768-808    TPY------GSSIFQS-KESSSVLSCDISPDDQFIVTGSGDKKATVYE

   WD40 Template    TGE-------CLRTLS-GHTSGVTSVSFSPDGKRLVSGSEDGTIKVWD