Input parameters:
Query = ENSDARP00000095447 (Len=433)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSDARP00000095447, Len=433):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MARENGEAGGDCSWKKQVDNIKEIFEFKEVLGTGAFSEVVLAEERSTGKMYAVKCIPKKALKGKESSIENEIAVLRKIKH 80
WD40-rpts
Query 81 ENIVALEDIYESSDHLYLIMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVNYLHTMGIVHRDLKPENLLYFNPQDG 160
WD40-rpts (___________________________________WD 1____________________________
Query 161 SKIMISDFGLSKMEGTGDVMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDSKLFEQILKADY 240
WD40-rpts ______)
Query 241 EFDAPYWDDISDSAKDFISCLMEKDPSKRNTCEQALRHPWIAGDTALCKNIHESVSRQMRKNFAKSKWRQAFNATAVVRH 320
WD40-rpts
Query 321 MRRLQLGSSMGSSMDQSNTANQNRILNANPPLNTTTNSTAPLTQNQKPAPNPNAILNNDMATGNTPTPRKDCTAPPHTSC 400
WD40-rpts
Query 401 SLASAASSSSGAEPCRPLPPSVASVSTVVTGTK 433
WD40-rpts
1 WD40-repeats found in QUERY=ENSDARP00000095447 (Len=433):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 5 93-167 2.92 235.23 0.04128 10.0% 16.18
Multiple sequence alignment of 1 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 93-167 SDHLYLIMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVNYLHTMGIVHRDLKPENLLYFNPQDGSKIMISD
WD40 Template TGECLRTLSGHTSG-----------------------------------VTSVSFSPDGKRLVSGSEDGTIKVWD