Input parameters:

  Query = ENSDARP00000094113 (Len=1555)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000094113, Len=1555):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MASGQDGVGNATCSKLAKPLHLQYLERSLRLDTFLRQTATVFNQNISSDDSDDGLGEGSSLASSNPLLAVKKDHISPEDE 80  
WD40-rpts                                                                                      

Query       81 TKDSCRDGETECGTLNGAVLQDTEHKADKASLYNFSRLKKSRKWLKGILLSDDTTDSDSDSDDSDFTMTREELQDMLRLH 160 
WD40-rpts                                                                                      

Query      161 KFTRLHQSKFHSDRELQHYQHYSTGLLSTHDPFYEQQRHLLGLKKKKIKEEKKCKAKLKKMKRKKKRGEEFSMEGRQHIT 240 
WD40-rpts                                                                                      

Query      241 KTFAKFSHDAPLPMIKKKHLTIEQLNARRRKVWLTIAKKEIPKAFKQKVSARNFVLTNARKLAHQCMREVRRAAIQAQKN 320 
WD40-rpts                                                                                      

Query      321 CKETLPRARRLTKEMLLYWKKYEKVEKEHRKRAEKEALEQRKLDEEMREAKRQQRKLNFLITQTELYAHFMGGKQNAGGD 400 
WD40-rpts                                                                                      

Query      401 CTQEEILRKLEDNSSQRQIDIGGGVMVNVSQEDYVDSDYYKSQALKNAKEAYQIHQARTRLFDEEAKDSRCASLHAASMS 480 
WD40-rpts                                                                                      

Query      481 GSGFGESYSLSNPSIQAGEDIPQPTIFNGKLKGYQLKGMNWLANLYEQGINGILADEMGLGKTVQSIALLAHLAERENIW 560 
WD40-rpts                                                                                      

Query      561 GPFLIISPASTLNNWHQEFSRFVPKFKVLPYWGNPHDRKVIRKFWSQKTLYTQNAPFHVVITSYQLVVQDVKYFQRVKWQ 640 
WD40-rpts                                                                                      

Query      641 YMVLDEAQALKSSTSVRWKILLQFQCRNRLLLTGTPIQNTMAELWALLHFIMPTLFDSHEEFNEWFSKDIESHAENKSAI 720 
WD40-rpts                                                                                      

Query      721 DENQLSRLHMILKPFMLRRIKKDVENELSDKIEILTYCQLTSRQRLLYQALKNKISIEDLLQSSMGSAQQAHSTTSSLMN 800 
WD40-rpts                                                                                      

Query      801 LVMQFRKVCNHPDLFERQEIRSPFHMSLKPFIMSKFLFRHAILHTIDHGKTKLKQTLLSPFSAQHIQQSLFHRKTDDEAS 880 
WD40-rpts                                                                                      

Query      881 SFSFLRFIDVSPAEMSNVMLQGTLVRWLALYLSFKSAYRLHHSRQWEEEKMSEVKGRGRLEKLCLSHRDLILWLNRPTSF 960 
WD40-rpts                                                                                      

Query      961 PNVHSSPVLQDLVFTSTGSLSICHTDAVIHSRRSSTRTLRQCQPTQPPKFLLAVTPRVTSVPLERYCADRSAEYEWRLMR 1040
WD40-rpts                                                                                      

Query     1041 DGGSLIAKQCFLYGSPELACAWAQRSQSFLPPNPGGVMALQQRHGWSFIRIPDKESLITDSGKLHTLDLLLTRLKSQGHR 1120
WD40-rpts                                                                                      

Query     1121 VLIYSQMTRMIDLLEEYMVYRKHTYMRLDGSSKISERRDMVADFQSRTDIFVFLLSTRAGGLGINLTAADTVIFYDSDWN 1200
WD40-rpts                          (_________________________WD 1_________________________)    

Query     1201 PTVDQQAMDRAHRLGQTKQVTVYRLICKGTIEERILQRAKEKSEIQRMVISGGNFKPDTLKPKEVVSLLLDDEELEKKLR 1280
WD40-rpts                                                                                      

Query     1281 LRQEEKRQLEESSKVKERKRKREKYAERKRKEDDPESKRKKEGVNMVIPYVPSADNSNLSADGEDSFISVDMDSAIPSPF 1360
WD40-rpts                                                                                      

Query     1361 SEISLSSELQPSSIPADESSSDMLVIVDEPVSSAQQSRATNSPASIAGSVSDTMNGVSSQDISSPGRGRSNRSRGRPKGS 1440
WD40-rpts                                                                                      

Query     1441 GGAGKSSVRKGRGRKSTAGSAAAMAGAMAGAAAASAAAYAAYGYSVSKGIPASGSLPTALIRSSTTPTFVPAGTSSPQAK 1520
WD40-rpts                                                                                      

Query     1521 SSAVATNSQTLAHGSSQSQHNPTKRGKIPSNHSGR 1555
WD40-rpts                                         

1 WD40-repeats found in QUERY=ENSDARP00000094113 (Len=1555):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg 11  1141-1196     2.95  236.59  0.03961       20.0%     32.28

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1 1141-1196   RKHTYMRLDGSSKISERRDMVADFQSRTDIFVFLLSTRAGGLGINLTAAD-TVIFYD

   WD40 Template    TGECLRTLSGHTS-----------------GVTSVSFSPDGKRLVSGSEDGTIKVWD