Input parameters:

  Query = ENSDARP00000092387 (Len=730)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000092387, Len=730):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MEIAGELTEDEVFKCLSGLGQSATGLQHTYLCLSAPGRDLKNVSILCNYIYLQKLELPYNKIKDLSCVSHMPYLITLDAS 80  
WD40-rpts                                                                                      

Query       81 HNQLTDFFGFQPPKNLKEVNFSHNQMTAMKDLSAYSSLTKLILDHNSFSVIRGLEKCKRLSHLSLAHNNISRIRGLDHLP 160 
WD40-rpts                                                                                      

Query      161 LRELCLAGNMINKIENLQTLHNLQVLDLSCNRIQSLTGLQNLRFLGTVNLESNLITEIKEAAHLHDLILLREINLLKNPV 240 
WD40-rpts                                                                                      

Query      241 QDHDDYRIAVIFLLQHLILLDKQTVTAEEKVAAVNKYDPPLEVVAARDHMTHLVYQLMQPQVIFDSTLPSLDAPYPMLVL 320 
WD40-rpts                                                                                      

Query      321 TGPQACGKRELAHKLCQEFSDYFAYGACHTTRGPYFGEEDGLDYHFVTEEEFHNMIQMGQFIQTMQYGGHWYGLSRESIE 400 
WD40-rpts                                                               (______________________

Query      401 RVAREGLACCVHMELEGVFSLKNSYFEPRYVLLIPSVVDNYVLFLKARGFYSNAQMETAVSRIDLYARINRERPGFFDSI 480 
WD40-rpts      _____________________________WD 1_______________________________________________

Query      481 IPCDDRAEAYRSLKQLVKEYLGLEEHSGGGDSSSITPDNTSTNTTGELPAASATESTDLMDSYSRNYQKKIQANMTPQRT 560 
WD40-rpts      ____)                                                                           

Query      561 EMASNHRRLQQIREALSGKSPGAYAELFQRSVPAAPSSLASQSHPPAGPSSSPVRPAGLSAPNLSEDSSSEESRASSGLS 640 
WD40-rpts                                                                                      

Query      641 MRSSAGVFSAESPARGSDAGSGPNIEPLDISMLGQDRDSLRGLTPDAPRPASDRVSPTHPSSPGRPGANVKPVLPPIPSG 720 
WD40-rpts                                                                                      

Query      721 RKTNDSGSKQ 730 
WD40-rpts                

1 WD40-repeats found in QUERY=ENSDARP00000092387 (Len=730):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg 14   378-485      2.87  233.34  0.04373       30.0%      0.88

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  378-485    MGQFIQTMQYGGHWYGLSRESIERVAREGLACCVHMELEGVFSLKNSYFEPRYVLLIPSVVDNYVLFLKARGFYSNAQMETAVSRIDLYARINRERPGFFDSIIPCDD

   WD40 Template    TGECLRTLS--GHTSGVT--------------SVSFS--------------------PDG----------KRLVS----------------------GSEDGTIKVWD