Input parameters:

  Query = ENSDARP00000092036 (Len=830)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000092036, Len=830):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MAAGALNLGKLMGEKMGLPCEKDTDDRPGHFNHEGKEESEDSKPKKIKADTQLSEQAPCSQVSSGVDQENSFNVEQTKKN 80  
WD40-rpts                                                                                      

Query       81 EELKAKTPAKRRKKEIIPQTTPQQDVPALTDTSELASSGRPKRRAAKVALDYLHSLAKDIGTPSESSTPARPKSGEAVVT 160 
WD40-rpts                                                                                      

Query      161 SQKKKPARSRGVKRKAPDSDSDCDGDEDFAPEKDDVEAESDEEDSEDSEPDVSLTMPRRGKQARGSYQCLLPNGLANNVM 240 
WD40-rpts                                                                                      

Query      241 EPVWNSFSRHKNRDENFSPWVFPEWIPSARDWHFLSNSEAEKYLPQEKESASFTFTREKINQPIQLQTVKRFESLPHHPE 320 
WD40-rpts                                                                                      

Query      321 RWDSLFFVGGPVRAMEWCPCPDGAEKKQYAAIYCHKGMDDTHQITKLYSGPALLQLWDLGDLQCKERPSTTPHLAYALAI 400 
WD40-rpts                                                                                      

Query      401 DDGYIWNIKWCPAGAWELPSTSRKAPQMPRLGVLAATFANGTIGVYSLPHPEALEKHYQSKDQHFMGCFMLFLQVKKLLS 480 
WD40-rpts                                                                                     (

Query      481 LKMGSNQADHKAQSLVGLWDLSSKSTLLRVRCPDGGVSLYPYHCFHAHDENIRTLSWCKASSHLLVTVGDDRMAKMWDVR 560 
WD40-rpts      __________________WD 1__________________) (_______________WD 2_______________)  

Query      561 KTHTPLLAVKRCLSPEVYWPLLWSGFLMAQECCFATYGQHGIHYFDSGYLGIKPFFVCPRKATIWSLSMSDWINAFAIVD 640 
WD40-rpts                                                        (_________________WD 3________

Query      641 NGGDCLFSCLPEMDMDPSNLRRRRFSVYRTDMVQFEAGQRTAGEEQAEEETEDKTSIPGREPLTYRGAVKKNFLHFHDLD 720 
WD40-rpts      ________)                                                                       

Query      721 MGNFSKCENRPMMKHLQQHELKGAAKVDQMPLSALYKVRFNPNMDAYNWLLSGGQSGLVRVNCARGLSCSIMMKELREAQ 800 
WD40-rpts                           (__________________WD 4__________________)                 

Query      801 AQFSAMFQSREPDDSVTAVRHSTADTVQVH 830 
WD40-rpts                                    

4 WD40-repeats found in QUERY=ENSDARP00000092036 (Len=830):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg 13   480-521      4.12  284.78  0.00901       17.5%     15.98
  WD 2:  Seg 15   523-558      5.28  332.83  0.00203       20.0%     44.15
  WD 3:  Seg 20   611-649      4.39  296.10  0.00635       12.5%     42.67
  WD 4:  Seg 25   742-783      4.42  297.37  0.00610       22.5%     36.96

Multiple sequence alignment of 4 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  480-521    SLKMGSNQADHKAQSLVGLWDLSS-K---STLLRVRCPDGGVSLYP
   WD 2  523-558    -----HCFHAH--DENIRTLSWCKAS---SHLLVTVGDDRMAKMWD
   WD 3  611-649    -GIKPFFVCPR--KATIWSLSMSD-W---INAFAIVDNGGDCLFSC
   WD 4  742-783    -KGAAKVDQMP--LSALYKVRFNP-NMDAYNWLLSGGQSGLVRVNC

   WD40 Template    TGECLRTLSGH--TSGVTSVSFSP-D---GKRLVSGSEDGTIKVWD