Input parameters:

  Query = ENSDARP00000091438 (Len=497)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000091438, Len=497):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MARGRAQTDSAASKQTKTVNSKKRPNEETPQPSTKKLKAKQQHKSKQKEETYIQASVKWTGGQKKVGQTSILHYIYKSSL 80  
WD40-rpts                                                                                      

Query       81 GQSIHAQLRQCLQEPFIRSLKSYKLHRTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVLNKTSFIQGKGAGDF 160 
WD40-rpts                            (_________________WD 1_________________)     (____________

Query      161 IGGMKFCPRDSSKVFVASGDGTVSVQSFEGLQSQILSRTPDCGHDHHDLCYWYCCVDVSVSRQMLATGDSTGRLLLLGLD 240 
WD40-rpts      _____WD 2_________________)          (__________________WD 3_________________)  

Query      241 GHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEMPHEKPVNADSTKLLTTDQRNEIRVYS 320 
WD40-rpts      (_________________WD 4_________________)   (________________WD 5_______________)

Query      321 SYDWSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQLLLNDKRTIDIYDANSGGLVHQLRDPNAAGIISLNK 400 
WD40-rpts                  (____________________WD 6___________________)   (_________________WD

Query      401 FSPTGDVLASGMGFNILIWNREDTLSSVNRKQTIVTGEDVGGRAGGSRSQRSSQQRPSRDRRAAADEAKLKKKLSATETK 480 
WD40-rpts       7_________________)  (_________________WD 8________________)                   

Query      481 SKTKSKTESKTSKSKKK 497 
WD40-rpts                       

8 WD40-repeats found in QUERY=ENSDARP00000091438 (Len=497):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  2   103-142      7.19  411.84  0.00018       32.5%     47.28
  WD 2:  Seg  5   148-187      7.21  412.64  0.00017       22.5%     54.67
  WD 3:  Seg 10   198-238      7.18  411.13  0.00018       15.0%     37.81
  WD 4:  Seg 13   241-280      8.34  459.36  4.0e-05       32.5%     54.72
  WD 5:  Seg 17   284-320      6.15  368.77  0.00067       12.5%     42.52
  WD 6:  Seg 22   333-377      3.45  256.98  0.02123       15.0%     40.84
  WD 7:  Seg 26   381-420      6.11  366.92  0.00071       27.5%     50.60
  WD 8:  Seg 29   423-461      3.10  242.83  0.03275        7.5%      8.37

Multiple sequence alignment of 8 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  103-142    -Y-KLHRTASP--FDRRVTSLEWHPTHPTTV-AVG---------SKGGDIILWD
   WD 2  148-187    -K-TSFIQGKG--AGDFIGGMKFCPRDSSKV-FVA---------SGDGTVSVQS
   WD 3  198-238    RTPDCGHDHHD--LCYWYCCVDVSV-SRQML-ATG---------DSTGRLLLLG
   WD 4  241-280    -G-HEIFKEKL--HKAKVTHAEFNP-RCDWLMATS---------SVDATVKLWD
   WD 5  284-320    -I-KDKNSYIA--EMPHEKPV--NA-DSTKL-LTT---------DQRNEIRVYS
   WD 6  333-377    HP-H----RQF--QHLTPIKATWHP-MYDLI-VAGRYPDDQLLLNDKRTIDIYD
   WD 7  381-420    -G-GLVHQLRDPNAAGIISLNKFSP-TGDVL-ASG---------M-GFNILIWN
   WD 8  423-461    -D-TLSSVNRK--QTIVTGEDVGGR-AGGSR-SQR---------SSQQRPSRDR

   WD40 Template    TG-ECLRTLSG--HTSGVTSVSFSP-DGKRL-VSG---------SEDGTIKVWD