Input parameters:

  Query = ENSDARP00000091406 (Len=762)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000091406, Len=762):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MYPQGRHPAPHQPGQPGFKFTVAESCDRIKDEFQFLQAQYHSLKVEYDKLANEKTEMQRHYVMYYEMSYGLNIEMHKQTE 80  
WD40-rpts                                                                                      

Query       81 IAKRLNAILAQIMPFLSQEHQQQVAQAVERAKQVTMTELNAIIGVRGLPNLPLTQQQLQAQHLSHAAHGPVALPPHPSGL 160 
WD40-rpts                                                                                      

Query      161 QPPGIPPVTGSGSGLLALGALGSQPHLPVKDEKNHHDLEHRESTNNSISPSDSLRTTSEKHRGSSDYSLDSKKRKVEDKD 240 
WD40-rpts                                                                                      

Query      241 SMSRYDSDGDKSDDLVVDVSNEDPATPRGSPAHSPPENGIDKPRPAKKDTPNSPASVASSGSTPSSKNKEHGHNDKSSTP 320 
WD40-rpts                                                                                      

Query      321 GLKSNTPTPRNDAPTPGTSTTPGLRPILGKPPMEALAAPALRTPLTYPTPFAMMSHHEMNGSLTNPGVYAGLHISPQMSA 400 
WD40-rpts                                                                                (_____

Query      401 AAAAAYGRSPMAGFEHPHMRAPGLPASLTSISGGKPAYSFHVSADGQMQPVPFPPDALIGPGIPRHARQINTLSHGEVVC 480 
WD40-rpts      _______WD 1___________)                                  (____________________WD

Query      481 AVTISNPTRHVYTGGKGCVKIWDISQPGSKSPVSQLDCLNRDNYIRSCKLLPDGRTLIVGGEASTLTIWDLASQTPRIKA 560 
WD40-rpts       2____________________)(_____________________WD 3____________________)     (____

Query      561 ELTSSAPACYALAISPDAKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISHDGTKLWTGGLDNTVRSWDLREG 640 
WD40-rpts      _____________WD 4________________)   (_________________WD 5________________)(___

Query      641 RQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHHTKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTP 720 
WD40-rpts      _______________WD 6_________________)  (_________________WD 7________________)(_

Query      721 YGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVIY 762 
WD40-rpts      _________________WD 8_________________)   

8 WD40-repeats found in QUERY=ENSDARP00000091406 (Len=762):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  4   395-423      3.04  240.42  0.03525        7.5%     11.50
  WD 2:  Seg  7   458-503      6.08  365.86  0.00073       22.5%     48.27
  WD 3:  Seg 11   504-550      7.60  428.63  0.00010       25.0%     48.55
  WD 4:  Seg 14   556-594      8.71  474.35  2.5e-05       30.0%     56.29
  WD 5:  Seg 18   598-636     10.01  528.20  4.7e-06       35.0%     55.82
  WD 6:  Seg 22   637-677      7.13  409.27  0.00019       25.0%     52.19
  WD 7:  Seg 26   680-718      8.53  467.17  3.1e-05       30.0%     53.43
  WD 8:  Seg 30   719-759      7.75  434.87  8.6e-05       32.5%     54.23

Multiple sequence alignment of 8 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  395-423    --------------------------SPQMSAAAAAAYGRSPMAGFEHPHMRAPG
   WD 2  458-503    LIG-------PGIPRHARQINTL-SHGEVVCAVTISNPTRHVYTGG-KGCVKIWD
   WD 3  504-550    ISQPGSKSPVS-------QLDCL-NRDNYIRSCKLLPDGRTLIVGGEASTLTIWD
   WD 4  556-594    -PR-------I-------KAELT-SSAPACYALAISPDAKVCFSCCSDGNIAVWD
   WD 5  598-636    -QT-------L-------VRQFQ-GHTDGASCIDISHDGTKLWTGGLDNTVRSWD
   WD 6  637-677    LRE-------G-------RQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLH
   WD 7  680-718    -KP-------D-------KYQLH-LHESCVLSLKFAYCGKWFVSTGKDNLLNAWR
   WD 8  719-759    TPY------GA-------SIFQS-KESSSVLSCDISADDKYIVTGSGDKKATVYE

   WD40 Template    TGE-------C-------LRTLS-GHTSGVTSVSFSPDGKRLVSGSEDGTIKVWD