Input parameters:

  Query = ENSDARP00000091405 (Len=759)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000091405, Len=759):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MYPQGRHPAPHQPGQPGFKFTVAESCDRIKDEFQFLQAQYHSLKVEYDKLANEKTEMQRHYVMYYEMSYGLNIEMHKQTE 80  
WD40-rpts                                                                                      

Query       81 IAKRLNAILAQIMPFLSQEHQQQVAQAVERAKQVTMTELNAIIGVRGLPNLPLTQQLQAQHLSHAAHGPVALPPHPSGLQ 160 
WD40-rpts                                                                                      

Query      161 PPGIPPVTGSGSGLLALGALGSQPHLPVKDEKNHHDLEHRENNSISPSDSLRTTSEKHRGSSDYSLDSKKRKVEDKDSMS 240 
WD40-rpts                                                                                      

Query      241 RYDSDGDKSDDLVVDVSNEDPATPRGSPAHSPPENGIDKPRPAKKDTPNSPASVASSGSTPSSKNKEHGHNDKSSTPGLK 320 
WD40-rpts                                                                                      

Query      321 SNTPTPRNDAPTPGTSTTPGLRPILGKPPMEALAAPALRTPLTYPTPFAMMSHHEMNGSLTNPGVYAGLHISPQMSAAAA 400 
WD40-rpts                                                                                      

Query      401 AAYGRSPMAGFEHPHMRAPGLPASLTSISGGKPAYSFHVSADGQMQPVPFPPDALIGPGIPRHARQINTLSHGEVVCAVT 480 
WD40-rpts                     (____________________WD 1___________________)   (________________

Query      481 ISNPTRHVYTGGKGCVKIWDISQPGSKSPVSQLDCLNRDNYIRSCKLLPDGRTLIVGGEASTLTIWDLASQTPRIKAELT 560 
WD40-rpts      WD 2_______________)(_____________________WD 3____________________)     (_______

Query      561 SSAPACYALAISPDAKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISHDGTKLWTGGLDNTVRSWDLREGRQL 640 
WD40-rpts      __________WD 4________________)   (_________________WD 5________________)(______

Query      641 QQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHHTKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGA 720 
WD40-rpts      ____________WD 6_________________)  (_________________WD 7________________)(____

Query      721 SIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVIY 759 
WD40-rpts      ______________WD 8_________________)   

8 WD40-repeats found in QUERY=ENSDARP00000091405 (Len=759):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  5   416-460      3.79  271.42  0.01361       20.0%     20.71
  WD 2:  Seg  7   464-500      5.89  357.84  0.00094       27.5%     48.66
  WD 3:  Seg 11   501-547      7.41  420.87  0.00013       25.0%     49.19
  WD 4:  Seg 14   553-591      8.55  467.99  3.1e-05       30.0%     56.29
  WD 5:  Seg 18   595-633      9.92  524.55  5.3e-06       35.0%     56.03
  WD 6:  Seg 22   634-674      6.90  399.61  0.00026       25.0%     52.31
  WD 7:  Seg 26   677-715      8.35  459.73  4.0e-05       30.0%     53.05
  WD 8:  Seg 30   716-756      7.55  426.42  0.00011       32.5%     53.98

Multiple sequence alignment of 8 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  416-460    MRAPGLP-------ASLTSI-SGGKPAYSFHVSADGQMQPVPFPPDALIGPGI
   WD 2  464-500    -A----R-------QINTL--SHGEVVCAVTISNPTRHV-YTGG-KGCVKIWD
   WD 3  501-547    IS----QPGSKSPVSQLDCL-NRDNYIRSCKLLPDGRTL-IVGGEASTLTIWD
   WD 4  553-591    -P----R-------IKAELT-SSAPACYALAISPDAKVC-FSCCSDGNIAVWD
   WD 5  595-633    -Q----T-------LVRQFQ-GHTDGASCIDISHDGTKL-WTGGLDNTVRSWD
   WD 6  634-674    LR----E-------GRQLQQHDFTSQIFSLGYCPTGEWL-AVGMESSNVEVLH
   WD 7  677-715    -K----P-------DKYQLH-LHESCVLSLKFAYCGKWF-VSTGKDNLLNAWR
   WD 8  716-756    TP----Y------GASIFQS-KESSSVLSCDISADDKYI-VTGSGDKKATVYE

   WD40 Template    TG----E-------CLRTLS-GHTSGVTSVSFSPDGKRL-VSGSEDGTIKVWD