Input parameters:

  Query = ENSDARP00000090792 (Len=771)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000090792, Len=771):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MYPQGRHPAPHQPGQPGFKFTVAESCDRIKDEFQFLQAQYHSLKVEYDKLANEKTEMQRHYVMYYEMSYGLNIEMHKQTE 80  
WD40-rpts                                                                                      

Query       81 IAKRLNAILAQIMPFLSQEHQQQVAQAVERAKQVTMTELNAIIGVRGLPNLPLTQQQLQAQHLSHAAHGPPVQLPPHPSG 160 
WD40-rpts                                                                                      

Query      161 LQPPGIPPVTGSGSGLLALGALGSQAHLPVKDEKNHHDLEHRERESSTNNSVSPSDSLRASEKHRGSSEYSLDPKKRRVE 240 
WD40-rpts                                                                                      

Query      241 EKDNMSRYDSDGDKSDDLVVDVSNEDPATPRVSPSHSPPENGLDKARALKKDAPNSPASVASSGSTPSSKAKDHPHNDKS 320 
WD40-rpts                                                                                      

Query      321 STPGLKSNTPTPRNDAPTPGTSNTPGLRPHPGKPPGMEALTAPALRTPLSIAPPYGTPFMMGHHPEMNGSLTSPGVYPGL 400 
WD40-rpts                                                                                      

Query      401 HISPQMSAAAAAAYGRTHMPGFDPHPHMRAPVLPASLTSIPGGKPAYSFHVSADGQMQPVPFPPDALIGPGIPRHARQIN 480 
WD40-rpts                         (________________________WD 1_______________________)(_______

Query      481 TLSHGEVVCAVTISNPTRHVYTGGKGCVKIWDISQPGSKSPVSQLDCLNRDNYIRSCKLLPDGRTLIVGGEASTLTIWDL 560 
WD40-rpts      __________WD 2_________________)(_____________________WD 3____________________) 

Query      561 ASQTPRIKAELTSSAPACYALAISPDAKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISHDGTKLWTGGLDNT 640 
WD40-rpts          (_________________WD 4________________)   (_________________WD 5____________

Query      641 VRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHHTKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKD 720 
WD40-rpts      ____)(__________________WD 6_________________)  (_________________WD 7__________

Query      721 NLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVIY 771 
WD40-rpts      ______)(__________________WD 8_________________)   

8 WD40-repeats found in QUERY=ENSDARP00000090792 (Len=771):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  4   420-472      3.28  250.08  0.02624       25.0%     34.69
  WD 2:  Seg  8   473-512      6.36  377.28  0.00051       22.5%     52.98
  WD 3:  Seg 12   513-559      7.49  424.20  0.00012       25.0%     47.77
  WD 4:  Seg 15   565-603      8.60  469.87  2.9e-05       30.0%     55.32
  WD 5:  Seg 19   607-645      9.91  523.99  5.4e-06       35.0%     54.42
  WD 6:  Seg 23   646-686      7.03  405.20  0.00022       25.0%     51.31
  WD 7:  Seg 27   689-727      8.49  465.21  3.3e-05       30.0%     53.39
  WD 8:  Seg 31   728-768      7.56  426.81  0.00011       32.5%     54.40

Multiple sequence alignment of 8 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  420-472    PGFDPHPHMRAPVLPA-------SLTSIP-GGKP-AYSFHVSADGQMQPVPFPPDALIGPGI
   WD 2  473-512    PR-------------H-------ARQINTLSHGEVVCAVTISNPTRHV-YTGG-KGCVKIWD
   WD 3  513-559    IS-------------QPGSKSPVSQLDCL-NRDNYIRSCKLLPDGRTL-IVGGEASTLTIWD
   WD 4  565-603    -P-------------R-------IKAELT-SSAPACYALAISPDAKVC-FSCCSDGNIAVWD
   WD 5  607-645    -Q-------------T-------LVRQFQ-GHTDGASCIDISHDGTKL-WTGGLDNTVRSWD
   WD 6  646-686    LR-------------E-------GRQLQQHDFTSQIFSLGYCPTGEWL-AVGMESSNVEVLH
   WD 7  689-727    -K-------------P-------DKYQLH-LHESCVLSLKFAYCGKWF-VSTGKDNLLNAWR
   WD 8  728-768    TP-------------Y------GASIFQS-KESSSVLSCDISADDKYI-VTGSGDKKATVYE

   WD40 Template    TG-------------E-------CLRTLS-GHTSGVTSVSFSPDGKRL-VSGSEDGTIKVWD