Input parameters:

  Query = ENSDARP00000090676 (Len=536)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000090676, Len=536):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MSAVCGDGRDSAMECGEKSSARCTSGGAEDSLDRLLPTVNTSLSPRKRTTSQCKSEPPLLRTSKRTIYTAGRPPWYNEHG 80  
WD40-rpts                                                                                      

Query       81 TQSKEAFVIGLCGGSASGKTTVARKIIEALDVPWVVLLSMDSFYKVLTSEQQLQAASNDYNFDHPDAFDFVLLVHTLRKL 160 
WD40-rpts                                                                                      

Query      161 KQGKSVKIPVYDFTTHGRQKEWKTVYGASVIIFEGIMSFADKELLKLLDMKIFVDTDSDIRLVRRLRRDITERGRDIEGV 240 
WD40-rpts                               (________________________________________WD 1__________

Query      241 IKQYNKFVKPAFEQYIEPTMRLADIVVPRGGGNMVAIDLIVQHVHSQLEERELSVRAALASAHQAQPLPQTLSVLESTPQ 320 
WD40-rpts      ______________________________)                                                 

Query      321 VRGMHTIIRNKDTNRDEFIFYSKRLMRLLIERALSFLPSQVHIVQTPQGEDYEGRIFHGKRITGVSILRAGETMEPALRA 400 
WD40-rpts                                                                                      

Query      401 VCKDVRIGKILIQTNQDTGEPELHYLRLPKDISEDHVILMDCTVSTGAAAMMAIRVLLDHDVQEEKILLVSLLMAEMGVH 480 
WD40-rpts                                                                                      

Query      481 SVAYAFPQVKIITTAVDKKVNDLFHIIPGIGNFGDRYFGTDAPTDWSDDDMDEPSC 536 
WD40-rpts                                                              

1 WD40-repeats found in QUERY=ENSDARP00000090676 (Len=536):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  5   186-271      2.95  236.59  0.03961       20.0%      1.41

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  186-271    YGASVIIFEGIMSFADKELLKLLDMKIFVDTDSDIRLVRRLRRDITERGRDIEGVIKQYNKFVKPAFEQYIEPTMRLADIVVPRGG

   WD40 Template    TGECLRTLSGHTSGVT-----------SVSFSPD--------------GKR----------LVSGS-----------EDGTIKVWD