Input parameters:

  Query = ENSDARP00000087373 (Len=2028)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000087373, Len=2028):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 APWLPVNMADENAEAELDWGGRHSLLVDEDTFFAMEGLQATLQQHEAELRQQDVSEESSTGYCNNFCEALMHYAGSRNSL 80  
WD40-rpts                                                                                      

Query       81 EHGLPLLEVYCLSINCFAAARPHLTGDSPSVALVLKRLALSCLELLLSVPQNNIPLEAWLQFHGSVQAAHEAMLQYGSTD 160 
WD40-rpts                                                                                  (___

Query      161 LHALRNITGEGGAWNNSVMVSLLTGQPTDPDEVNAYLALEGDDFMEMRIKHLEKVGELEKALILIKACANCSLLSNQSTF 240 
WD40-rpts      ____________________________________________________________________________WD 1

Query      241 RQTFVTQLCQLLPSEEAILEISRIDAKDVLDIICNLDAEGDERTAFILCTTYFTQQLQQDSTYCSWELTLLWSKLQRRID 320 
WD40-rpts      _______________________________________________________________________________)

Query      321 VSLESFIERCLQFAAIARTIYHLLFLIRVIQTEAMQLGLAVSVELCVKALRLPRQDDIEAKTMVCKAVVCLLPDDLEVIR 400 
WD40-rpts                                                                                      

Query      401 ACQLTEFLLSPSQEAFDILEELYLRPDEKYDEENAIIPNFLRCELLLSLKAHWPIDPEFWDWKTLKRYCIQLLGLEPVDE 480 
WD40-rpts                                                                                      

Query      481 IEDEAAPGELCNLGVVLNEEAGKEEEDECELDALSSAGEQQTVEESEKGQKDSEDVSKLADKHQRDKFLCQICHKEVAET 560 
WD40-rpts                                                                                      

Query      561 RFCHHARKHMEDGMWTCPVCLQKFKTKKEFEPHSKKHIQISAKDHFKKKKVKKKVDQTKDFFKEDSSDELEPGQIPLDPS 640 
WD40-rpts                                                                                      

Query      641 LAMYYQSTHDPVVLEHILEKAASVPEKQVESDYVTFDYINTYFKLQDRDVYQCPATDCSKNFKLFKYLGVHIKNEHDSED 720 
WD40-rpts                                                                                      

Query      721 PNLKHYLKMKDCREKCTFCRKTFMTAYHHRLHRWIHYGDDPYMCVVTGCGARFDTTNELLAHKHGHGFRLSYCCELKGCS 800 
WD40-rpts                                                                                      

Query      801 FSYCDLGQLYHHEAQHFRDAAYTCTSPGCKNFYYSRKEFLQHLATHDITFTEKDFEAQRKAKRKLLLAVVESDSAFGSKV 880 
WD40-rpts                                                                                      

Query      881 ETENCVQKSGSSSSSQTLAKGRSSVSQTCVAVCFDGKKFTCGLKKCGKTYTTARELQKHLRIAHSDTFNEKDQLCKKKVQ 960 
WD40-rpts                                                                                      

Query      961 VKHSTTRNEDLPKSDPDNTVKTSSTEKSSPKKALSPASESVDCETTKSNLDLDAALTNIMLGLGQLNLNSSNTRHSMCNS 1040
WD40-rpts                                                                                      

Query     1041 QSTCTPTLNTRSPAKAAHSKNESRSHVTGSESKKLPNKSESPKTHDNNKDVSDKKQKKESVSEEEQPQSKSLTKPYNCEA 1120
WD40-rpts                                                                                      

Query     1121 KSCHYQSTTSCALMQHYIKVHGYSEKMVKEMEVFQSETLEPFKTPDSSENSVLEDDQSQSEFLVQATVKPYACEAKSCNY 1200
WD40-rpts                                                                                      

Query     1201 QSVTSHALLKHYIKIHGYSEKKVKNMEVFQSQIFKPFKCHLCSKSYRNKKELRRHYIQMHHIKEDIVEQMKCSFKKNVVE 1280
WD40-rpts                                                                                      

Query     1281 KAPVLSSPKKNTEVKPQSSKKADVKTQKQDNALWQQKCPKHDYRLWVRKVVTKNVHVKAEKKKKASSETRSDVKNTTVDV 1360
WD40-rpts                                                                                      

Query     1361 RGSRRLISKGNLSYILTKYNKPFHCVHKNCNAAFNNQNALVGHLQMVHHYNRSQLCFPCEHKGCEKQYSTLSSLTKHYRR 1440
WD40-rpts                                                                                      

Query     1441 DHNFTKKEKERKILPKLPCTSKSIPKRQMASTEEPIPRFKCTYANCNESYHLNSSLLRHTSQFHQNQTPQNSANTSGNNE 1520
WD40-rpts                                                                                      

Query     1521 FKTSYKKHVFYRHCDPSDSLVVRLQSTPKKEESKNGCQTKLIISPPSQSSKDSQNMPLKQSLRCCRNDQKINSSENFEGV 1600
WD40-rpts                                                                                      

Query     1601 EETPEEELDEVLKPQRINLKNRFDLIVYRTHEEALQMCQDRCLPVAFPCMIQNCDSVVVSMHSLNRHYINVHRFKRKQLT 1680
WD40-rpts                                                                                      

Query     1681 ENKDKLCFTAEQLEEIIQKKSAVSAIPDLTRIPNGVLKMEYQSEPATPGGPSQPMSLHSIKTDSKEKEGIEFSEEPLPDR 1760
WD40-rpts                                                                                      

Query     1761 SLLIEAEDLLYGSPKSSGNPEKPVSEESLNHKDEPESELTAPPLIRPPPLDLSPPATLRITVDESSFEASGKDSKSINIP 1840
WD40-rpts                                                                                      

Query     1841 SSVSISVPTPTRQPLRRKNELSEPPLPPVPLSPVPMDPVEHSLSPRAFDIAAYKPMGFESSFLKFIKDKDEEIKLEKPWT 1920
WD40-rpts                                                                                      

Query     1921 AVVSNPCLKPDPNRRRDCFRRNCSVKENTESGAPISRSRRFRSSPLRHLISKGECTSIQNLRMILERALGGCGDQAIKQL 2000
WD40-rpts                                                                                      

Query     2001 QFLKPVVVLERPKSFASIFDLLPSETKV 2028
WD40-rpts                                  

1 WD40-repeats found in QUERY=ENSDARP00000087373 (Len=2028):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1   157-320      3.02  239.42  0.03634       22.5%     16.61

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  157-320    GSTDLHALRNITGEGGAWNNSVMVSLLTGQPTDPDEVNAYLALEGDDFMEMRIKHLEKVGELEKALILIKACANCSLLSNQSTFRQTFVTQLCQLLPSEEAILEISRIDAKDVLDIICNLDAEGDERTAFILCTTYFTQQLQQDSTYCSWELTLLWSKLQRRID

   WD40 Template    TGECLRTL----------S-------------------------GH--------------T-----------------SGVTS---------VSFSPD----------GK--------RLVSGSEDG------------------TIKVW-------------D