Input parameters:

  Query = ENSDARP00000086000 (Len=1051)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000086000, Len=1051):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MPGMVLFRRRWSVGSDDLVLPAFFLFVLHCIWLVVLSVVLFGLPYSSEQSCSVTLVDHGRGYLGILVSCLICESAIMWLS 80  
WD40-rpts                                                                                      

Query       81 MRGSILYTQPREAVQYVLYIRLAILLVELVYAVVGIAWLVQYYQPCPDITAKNLALGIVACNWLVIFSVCFTMMCTFDPT 160 
WD40-rpts                                                                                      

Query      161 GRTFVKLKATRRRQRNLTTYTLRHRLEEGQASSWSRRLKFFMCCTRAKDTQSDAYSEVASLFAEFFRDLDIVPSDIIAGL 240 
WD40-rpts                                                                                      

Query      241 VLLRQRQRAKRSAILDQANNDVLAFLSGMPVTRNTKYLDLKNSTEMAMYKEVCYYMLFAMAAYGWPVYLLRKPACGLCRL 320 
WD40-rpts                                                                                      

Query      321 VSTCSCNTSVSGSRLSQSVTVEEDNCCGCNVLAIRRQFLDRDLKEVQIVYTSCHDAVYETPFFVAVDHAKKKVVISIRGT 400 
WD40-rpts                                                                                      

Query      401 LSPKDALTDLTGDSERLPVEEQHGTWLGHKGMVYSAEYIKKKLEQEMILSQAFGRDLSKGTMHYGLVIVGHSLGAGTAAI 480 
WD40-rpts                                                                (_____________________

Query      481 LSFLLRPQYPSLQCYSYSPPGGLLSEDAMEYSKEFVTSVVLGKDLVPRIGLSQLEGFRRHLLEVLQKSDKPKWRIIAGGT 560 
WD40-rpts      _____________WD 1_________________________________)                             

Query      561 KCIPKSELPMDDEAPVSQGVTPSSSRLWLHPSDLSIALSASTPLFPPGRVIHVVHNHPPEMCCGQEEPTYSALWGDNKAF 640 
WD40-rpts                                                                                      

Query      641 DEVIISPAMLNEHMPHVVMDGLNKVLENYNKGKTALLSAAKIMVSPTEVDLNPETIFLDTSNSPQPTPATHHRRNSSVRS 720 
WD40-rpts                                                                                      

Query      721 CARSEISLDGFSECPPPPVPIVLTGARERLAVELRERKAPLAIMESLSDAESVYSLDSRRSSAALRGSPCLGSLPFPLDA 800 
WD40-rpts                                                                                      

Query      801 PIPEENPSLSSRTELLAAEGLTQDLGEAGPYIPTPPEPEEPSNDIPYNNEYFTPELKSTTDPETDSSVVPDSQDSYRVAS 880 
WD40-rpts                                                                                      

Query      881 RTGSRPEKLREFEEKEVKVDLSQTLPAVTPLSNGTPSQAVLEFAQYLDSLFRLDGSSSPPLELSDAESESGRGSYSQAEE 960 
WD40-rpts                                                                                      

Query      961 HQEEQRVKNADKLLARAALEPNLVPKPPRTFAGSADPSSGISLSPSFPLSSSGELNDFSPADGVLPVNHTSTLRTSAASP 1040
WD40-rpts                                                                                      

Query     1041 NPKETALSSMV 1051
WD40-rpts                 

1 WD40-repeats found in QUERY=ENSDARP00000086000 (Len=1051):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  7   459-531      2.85  232.57  0.04475       27.5%     15.61

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  459-531    KGTMHYGLVIVGHSLGAGTAAILSFLLRPQYPSLQCYSYSPPGGLLSEDAMEYSKEFVTSVVLGKDLVPRIGL

   WD40 Template    TGECLRTL--SGHT-----------------SGVTSVSFSPDGKRL--------------VSGSEDGTIKVWD