Input parameters:

  Query = ENSDARP00000085784 (Len=529)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000085784, Len=529):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MGTQRNGYSKRETFILSVDVGTTSIRCHVYDKSASIRGSCSAKVSLLYPQPGWVEIDPDELWDGFVTVVKGAVQDSGLQM 80  
WD40-rpts                                                                                      

Query       81 CQMESLGISTQRATFMTWDRNTGKPFHKFITWQDMRAAELVRSWNGSCTMKTVHGVMKMLHFLSRQKRFLAASLVVFTTQ 160 
WD40-rpts                                                                                      

Query      161 HVSLRLVWALNNIPQLRQAVEDGTCYFGTIDTWLLYKLTKGLVHATDYSNASATAIFDSYQMCWSGFLCSLLSIPLSILP 240 
WD40-rpts                                                                                      

Query      241 KVQDTSHKFGLCDSSIFGVPIPIMCVMADQQAAMFGECCFDTGDVKITMGTGTFMDINTGSKPHTSVAGLYPLVGWKIGA 320 
WD40-rpts                                                                                    (_

Query      321 DVVYLAEGNAAGTGAAIKWAQDLELFSDVKETEAIATSVEDSDGVFFVPSFSGLQAPLNDPKACASFMGLKPSTTKRHLV 400 
WD40-rpts      ___________________________WD 1____________________________)                    

Query      401 RAILESIAFRNKQLFDVMLRETRIPITKIRADGGVCTNDFIMQLTADLLGRKIARPSHFDMSCLGAAFVAGLGTGYWRNQ 480 
WD40-rpts                                                                                      

Query      481 EELKKLLSTDQHFLPRRSKSEGEKGGLYRGVLQSWEKALQRSMHWYNQP 529 
WD40-rpts                                                       

1 WD40-repeats found in QUERY=ENSDARP00000085784 (Len=529):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  8   319-380      3.24  248.34  0.02767       17.5%      6.08

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  319-380    GADVVYLAEGNAAGTGAAIKWAQDLELFSDVKETEAIATSVEDSDGVFFVPSFSGLQAPLND

   WD40 Template    TGECLRTLSG---HT---------SGVTSV----------SFSPDGKRLVSGSEDGTIKVWD