Input parameters:

  Query = ENSDARP00000084377 (Len=586)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000084377, Len=586):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MQANGTGGQEPEPQLSCRNGESSSSAAGAVHSNGLLSSANNGLPSSTESPAPDTGMKKKKRLSQSDEDVIRLIGQHLHGL 80  
WD40-rpts                                                                                      

Query       81 GLKAPVNEHLKLSSYSGYSRYRGLVVVVEWDQAESDLNELKALMHSPSAVVRMKFLLLQQKYLEYLEDAKVLEALQVLRS 160 
WD40-rpts                                                                                      

Query      161 ELTPLKYNTERIHVLSGYLMCSNSEDLRLKAEWEGKGTASRSKLLDKLQTYLPPSVMLPPRRLQTLLRQAVELQRDRCLY 240 
WD40-rpts                                                                                      

Query      241 HNTKLDSGLDNVSLLIDHVCSRKQFPCYTQQILTEHCNEVWFCKFSNDGTKLASGSKDTTVIIWQVDPDSQQLKQLKTLE 320 
WD40-rpts                                (_________________WD 1________________)       (_______

Query      321 GHAYGVSYLAWSPDDTYLIACGPDDCSELWLWNVQTGELRTKMSQSHEDSLTSVAWNPDGKRFVTGGQRGQFYQCDLDGN 400 
WD40-rpts      ___________WD 2_________________)(___________________WD 3__________________)  (_

Query      401 LLDSWEGVRVQCLWCLGDGRTVLASDTHQRIRGYNFEDLTDRNIVQEDHPIMSFTVSKNGRLALLNVATQGVHLWDLQDR 480 
WD40-rpts      _______________WD 4_______________)(__________________WD 5_________________)   (

Query      481 VLVRKYQGVTQGFYTIHSCFGGYNEDFIASGSEDHKVYIWHKRSELPIAELTGHTRTVNCVSWNPVLPGLMASASDDGTV 560 
WD40-rpts      __________________WD 6__________________)   (_________________WD 7______________

Query      561 RVWGPAPFLDSQDTDGLTVECYSMDS 586 
WD40-rpts      ___)                      

7 WD40-repeats found in QUERY=ENSDARP00000084377 (Len=586):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  3   267-305      8.95  484.23  1.9e-05       35.0%     45.65
  WD 2:  Seg  6   313-353      7.98  444.31  6.4e-05       32.5%     55.18
  WD 3:  Seg 10   354-396      8.48  465.08  3.4e-05       32.5%     55.20
  WD 4:  Seg 14   399-435      6.24  372.43  0.00060       17.5%     54.66
  WD 5:  Seg 18   436-476      7.40  420.44  0.00013       15.0%     52.20
  WD 6:  Seg 22   480-521      7.31  416.77  0.00015       27.5%     53.07
  WD 7:  Seg 26   525-564      8.47  464.69  3.4e-05       37.5%     52.89

Multiple sequence alignment of 7 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  267-305    -CY---TQ-QILTEHCNE---VWFCKFSND-GTKLASGSKDTT--VIIWQ
   WD 2  313-353    -LK---QL-KTLEGHAYG---VSYLAWSPD-DTYLIACGPDDCSELWLWN
   WD 3  354-396    VQTGELRT-KMSQSHEDS---LTSVAWNPD-GKRFVTGGQRGQ--FYQCD
   WD 4  399-435    -GN---LL-DSWEGVR-----VQCLWCLGD-GRTVLASDTHQR--IRGYN
   WD 5  436-476    FED---LTDRNIVQEDHP---IMSFTVSKN-GRLALLNVATQG--VHLWD
   WD 6  480-521    -RV---LV-RKYQGVTQGFYTIHSCFGGYN-EDFIASGSEDHK--VYIWH
   WD 7  525-564    -EL---PI-AELTGHTRT---VNCVSWNPVLPGLMASASDDGT--VRVWG

   WD40 Template    TGE---CL-RTLSGHTSG---VTSVSFSPD-GKRLVSGSEDGT--IKVWD