Input parameters:

  Query = ENSDARP00000083606 (Len=1155)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000083606, Len=1155):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 LDCARKKEKEVERKIRANDREYNSSFKYATNCIKTSKYNPFSFLPLNLFEQFQRIANAYFLFLLILQVIPAISSLSWFTT 80  
WD40-rpts                                                                                      

Query       81 VVPLVLVLSVTAAKDAIDDINRHRSDRQVNNRKVNVLISGKLTSEKWMNVQVGDIIKLENNQFVTADLLLLSSSEPLNLV 160 
WD40-rpts                                                                                      

Query      161 YIETAELDGETNLKVKQSLTVTGDMGHNLEALAAFNGEVCCEPPNNRLDRFTGTLTFDTQKYSLDNERVLLRGCTLRNTD 240 
WD40-rpts                                                                                      

Query      241 WCFGLVLFAGPETKLMQNCGKSTFKRTSIDRLMNVLVLFIFALLALMCIILAVGHGIWENYTGSKFNVFLPHEENAAFSA 320 
WD40-rpts                                                                                      

Query      321 FLTFWSYIIILNTVVPISLYVSMEVIRLGNSYYINWDRNMYHTRTDTPAEARTTTLNEELGQIKYIFSDKTGTLTQNIMT 400 
WD40-rpts                                                                                      

Query      401 FNKCSINGKSYGDVFQHYSGQTLEITEETTPVDFSFNGLADPKFLFYDHSLVEAVKLELPEVHAFFRLLALCHTCMAEEK 480 
WD40-rpts                                                                                      

Query      481 KEGCVGHLVYQAQSPDEGALVTAARNFGFVFRSRSPETITIEEMGIQRTYELLAILDFNNVRKRMSVIVRNPEGKLSLYC 560 
WD40-rpts                                                                            (_________

Query      561 KGADTIIYERLHPSCSKLMEVTTEHLNEFAGEGLRTLVLAYKDLDEDYFAEWKQRHHESSVAMEDREEKLDKVYEEIEKD 640 
WD40-rpts      __________________________________________________WD 1__________________________

Query      641 MMLIGATAIEDKLQDGVALTIELLAKAEIKIWVLTGDKQETAENIGYSCNLLREEMNDVFIVAAHSPEEVRQELRDARLK 720 
WD40-rpts      ________________________________)                                               

Query      721 MQPSTEQDKFLIPEVILGNTPKVVQDEHVNGEYGLVINGHSLAFALESSMELEFLRTACMCKTVICCRVTPLQKAQVVEL 800 
WD40-rpts                                                                                      

Query      801 VKRYKKAVTLAIGDGANDVSMIKAAHIGVGISGQEGMQAVLSSDFSFAQFRFLQRLLLVHGRWSYLRMCKFLRYFFYKNF 880 
WD40-rpts                                                                                      

Query      881 TFTFVHFWYAFFCGFSAQTVYDEGFITLYNLVYTALPVLGMSLFDQDVNANWSLEFPQLYVPGQLSQYFSKRAFMMCALH 960 
WD40-rpts                                                                                      

Query      961 SCYSSLVLFFVPYATTYDTARADGRDGADYQSFALITQTCLTVTVCVQLGLDLSYWTVVNHLFVWGSLGMFFFLTFTMYT 1040
WD40-rpts                                                                                      

Query     1041 DGLFKLRPASFAFIGTARNCLNQPNVWLTVALTALLCVLPVVAYRFIYCQIYPTINDKVRYKMRQMKEPAPRPRPRLTRR 1120
WD40-rpts                                                                                      

Query     1121 STRRSGYAFSHAQGYGDLVTSRRFLRRPAPARSAG 1155
WD40-rpts                                         

1 WD40-repeats found in QUERY=ENSDARP00000083606 (Len=1155):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg 21   551-673      3.11  243.26  0.03232       20.0%     39.39

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  551-673    NPEGKLSLYCKGADTIIYERLHPSCSKLMEVTTEHLNEFAGEGLRTLVLAYKDLDEDYFAEWKQRHHESSVAMEDREEKLDKVYEEIEKDMMLIGATAIEDKLQDGVALTIELLAKAEIKIWV

   WD40 Template    TGECLRTLSGHTSG-------------------------------VTSVSFSPDG----------------------------------KRLVSG-------SEDG-----------TIKVWD