Input parameters:

  Query = ENSDARP00000081244 (Len=784)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000081244, Len=784):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MSLQRMFSCSRLLARPNALQTFRRAASQGKMPLARAHGKSFAHRSELRQAKRIVVKLGSAVVTRGDECGLALGRLASIVE 80  
WD40-rpts                                                                                      

Query       81 QVAMLQNQGREMMIVTSGAVAFGKQRLRHEILLSQSVRQALHSGQNQLKDMSLPVLEARACAAAGQSGLMALYEAMFTQY 160 
WD40-rpts                                                                                      

Query      161 STCTAQILVTNLDFHDEQKRRNLNSTLYELLRMNIVPIINTNDAVVPPPEPNSDLQGVNVISIKDNDSLAARLAVEMRAD 240 
WD40-rpts                                                                                      

Query      241 LLIALSDVEGLYDSPPGSDDAKLLDTFYPGDQQSITYGTKSRVGIGGMEAKVKAALWALQGGTSVVIANGTHPKVTGHVI 320 
WD40-rpts                                                                                      

Query      321 TDIVEGKKVGTFFSEVKPAGTGPTVEQQTEMARSAGRTLASLEPEQRSDIICALADLLTERKEEILSANKKDMENAVNTG 400 
WD40-rpts                                                                                      

Query      401 RLSPAMLKRLSLSSSKLNSLSIGLRQIAVSSQDSVGRVLRRTRVANNLELEQITVPIGVLLVIFESRPDCLPQVSALAIA 480 
WD40-rpts                                                                                      

Query      481 SGNALLLKGGKEAANTNRILHELAQEALSIHGVKDAIQLVSTREEVEDLCRLEKMIDLIIPRGSSQLVRDIQRAAKGIPV 560 
WD40-rpts       (___________________________________________WD 1_______________________________

Query      561 LGHSEGICHVYVDHEASIDKAIKIIRDSKCDYPAACNAMETLLVHRDLLRTPVFDQIIDMLRTEQVKIHAGPKFASYLTF 640 
WD40-rpts      ___________)                                                                    

Query      641 SPSEVKSLRTEYGDLECCIEVVDSMQEAIDHIHKYGSSHTDVIVTENENTAEQFLQQLDSACVFWNASSRFADGYRFGLG 720 
WD40-rpts                                                                                      

Query      721 AEVGISTARIHARGPVGLEGLLTTKWVLRGEGHTVADFSEHGSMTYLHENLPVAQLLPGYRTTS 784 
WD40-rpts                                                                      

1 WD40-repeats found in QUERY=ENSDARP00000081244 (Len=784):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg 12   482-572      2.84  231.83  0.04577       25.0%     27.89

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  482-572    GNALLLKGGKEAANTNRILHELAQEALSIHGVKDAIQLVSTREEVEDLCRLEKMIDLIIPRGSSQLVRDIQRAAKGIPVLGHSEGICHVYV

   WD40 Template    TGECLRTLS---------------------GHTSGVTSVSF-----------------SPDGK-------------RLVSGSEDGTIKVWD