Input parameters:

  Query = ENSDARP00000080599 (Len=821)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000080599, Len=821):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MAGTGNSSTSGMGDIIQLNVGGTRFSTSRQTLTWIPDSFFSSLLSGRISTLRDETGAIFIDRDPTAFAPILNFLRTKELD 80  
WD40-rpts                                                                                      

Query       81 LRGVNISILRHEAEFYGITPLVRRLLLCEELERSSCGSVLFHGYLPPPALPARSSAVGQASAVIGPEERSGPAGAEGGYP 160 
WD40-rpts                                                                                      

Query      161 RSCPQSSLPGPSGADGPHRLGSPVDPRKVLIVAGHHNWIVAAYAHFVICYRIKESSGWQQVFSSPYLEWAIERVALNAKV 240 
WD40-rpts                                                                                      

Query      241 VGGPHGDKDKMVAASSENRIILWSIQDGGNGSEIGVFSLGVPVDSLFFIGSQLVATSHTGKVGVWNAVTQHWQVQDVVPI 320 
WD40-rpts                                (_________________WD 1_________________)              

Query      321 TSCDTAGSFLLLGCNNGSIYYIDMQKFPLRMKDNDLLVTELYHDPSNDAITALSVYLTPKTSVSGNWIEIAYGTSSGAVR 400 
WD40-rpts                                                                                      

Query      401 VIVQHPETVGSGPQLFQTFTVHRSPVTKIMLSEKHLVSVCADNNHVRTWTVTRFRGMISTQPGSTPLASFKIISLEETES 480 
WD40-rpts                                                                                      

Query      481 HNSYSSGNDIGPFGERDDQQVFIQKVIPITNKLFVRLSSTGRRICEVQSVDGTTITCFTVRECEGSSRMGSRPRRYLFTG 560 
WD40-rpts                                                         (____________________WD 2____

Query      561 HANGSIQMWDLTTAMDTANKSDDKAKREPEMGGPTEEELLKLLDQCDLSTSRCATPNISPAPSVLQHSRLRQSCSSLQLQ 640 
WD40-rpts      ________________)                                                               

Query      641 AQEPIPETATYGALRPYRESPLLARARRTESFHSYRDFHSLNLTKALLENHSQCASTEDEIRQSVGENITEDTDKRNSTI 720 
WD40-rpts                                                                                      

Query      721 DLSTSRASETHPAVTRKPPDSPGDQRRRAHLMEEGAADCRRRGTFEANFLSRKKAPPVSELSPPPAGVDGGGSDSSSTAS 800 
WD40-rpts                                                                                      

Query      801 PSPTKLSTSPRHRKPPDSACE 821 
WD40-rpts                           

2 WD40-repeats found in QUERY=ENSDARP00000080599 (Len=821):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg 10   267-306      4.69  308.53  0.00432       27.5%     21.97
  WD 2:  Seg 27   532-577      2.95  236.48  0.03974       22.5%     20.51

Multiple sequence alignment of 2 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  267-306    DGGNGSEIGVFSLGVPVDSLFFIGSQLVATSHTGKVGVWN-------
   WD 2  532-577    -GTTITCFTVRECEGSSRMGSRPRRYLFTGHANGSIQMWDLTTAMDT

   WD40 Template    TGECLRTLSGHTSGVTSVSFSPDGKRLVSGSEDGTIKVWD-------