Input parameters:

  Query = ENSDARP00000080499 (Len=1310)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000080499, Len=1310):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 LDKLRNMAAEHIGELASMENSNRGARPGFCSEKYSLLVIVGQPGPAGFVDLLVSEIERGLRSWDVDSSACNIDEQLKLFI 80  
WD40-rpts                 (________________________WD 1_______________________)                

Query       81 SRHSAFFSEDLKGQKTLQHSGDVLETQVIVNPSHDLVCSEVRRLISDTSLHKLLILAGQCVEETGDLVLQTGSFSLEDFI 160 
WD40-rpts                                                                                      

Query      161 QIFTDEEIGDLLSSADPTQKARLTLSCPESGKWKTSQLEKHNLQDYIEIKTNPPLVLPEMEGLQEFTEYLSESLEPQSPF 240 
WD40-rpts                                                                                      

Query      241 DLLVPPSTVGFLKLSRPCCYVFPGGRGDSAFFAVNGFNVLVNGGSDARSCFWKLVRHLDRVDSVLLTHAGVDNLPGINSL 320 
WD40-rpts                                                                                      

Query      321 LYRKVAEHEEEQSAGSQSSDDWQKNLISPEIGVVFFNASERLKKLQSDPRVLRSSDQVSLTLQHLEKLSIFPERLSRSAG 400 
WD40-rpts                                                                                      

Query      401 PTIEPVILFQKMGVGRLDLYVLNPVKGSKELEAFLQTWPASPPNIKPTDIPLESIVSICALLVWHPANPREKIIRVLFPG 480 
WD40-rpts                                                                                      

Query      481 CTPQSKIFEGLERLKHLEFLKHSVVSLKDLEASKLDKQPKHTGSKESLKSISKESRPGSALLKDKVVKVDPKKQDTKTKT 560 
WD40-rpts                                                                                      

Query      561 KPTNESEEKAKPKDDVKLRPKTAEKQVAKKEPAKDEKKEVRKKEEKPPTSIAKKDEHVEKKKEPLKKDLGAKPKKDIVKP 640 
WD40-rpts                                                                                      

Query      641 DLKKEIKKEVKPENKKTTKPPVKEVKKPAGSLPGNTESRKSVGKNGSLKKDVLVSKKDPVTKGKPKPDKKEPDNVKSSSG 720 
WD40-rpts                                                                                      

Query      721 DKSKTSTPEDISKQLEKLKLDNEHGSLQDAEGNNMSSRTASDCSAGQVNGSKTGTEESPEKFRSMDGTPGSNNPSPLTKT 800 
WD40-rpts                                                                                      

Query      801 PKSERSVNFDLTPTELDGCLKEDACTSSDEKTLELVSPADSGKNSSWHTRYPQSPDNACLDSSEDCKVGIRKSGLAVEDG 880 
WD40-rpts                                                                                      

Query      881 QLGICKNSRSNIENSSISSQDRQSSFLSSTSFKDGSTSITSFPAEVGSPHSTEVEDSLSVSFEQVPVCHPQEEMGSLAYT 960 
WD40-rpts                                                                                      

Query      961 NGHLADRDPKADMSLPLKTSHNSHHAYDDSENHLYGLQGDVLPHDVDLCLVSPCEFKHHKSLENQQGLSSEVAAPSPDLS 1040
WD40-rpts                                                                                      

Query     1041 QEPLRDHQSQETTSSVSVSLISVSDSDVPPATEECPSISEELDSEEDTTSDLFPPHHPSSHSLHHNSQDPPPAPMKDLPP 1120
WD40-rpts                                                                                      

Query     1121 LPPQRGACMADPEADSQGKSSKNVTAKTKKTAAAAPTKTGSANVVAQTGKTKIGGPVSATGTIRVTSSLDTRPPSRSAIG 1200
WD40-rpts                                                                                      

Query     1201 GSRPTSSKSSSTHTVDVEFFRRLRSSCYIISGDEPHKETVMRSILDSLLEGKASWPDVQVTLIPTFDSLSMHNWYQQTHE 1280
WD40-rpts                                                                                      

Query     1281 RQKDLSITVLGSNSTVAMQDETFPACKVEF 1310
WD40-rpts                                    

1 WD40-repeats found in QUERY=ENSDARP00000080499 (Len=1310):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1    12-64       2.97  237.41  0.03864       12.5%     -5.01

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   12-64     IGELASMENSNRGARPGFCSEKYSLLVIVGQPGPAGFVDLLVSEIERGLRSWD

   WD40 Template    TGECLRTLSGHTSGVTSVSFSPDGKRLVSGSEDG-------------TIKVWD