Input parameters:

  Query = ENSDARP00000080170 (Len=1694)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000080170, Len=1694):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MMKNKSKKQEDEGSTQSNASSNSASEESNRSGSESGSQSESEQGSEKAQSRHSESNSTSDSESHSESGSESNGSKSHQSS 80  
WD40-rpts                                                                                      

Query       81 AQVKDKPVRKKDNLADVKKVHKKMWEEHPDVYGVRRSSRSRQEPARLNIGAEGSSDSEGESSKRKSSRQKKKENTWKDDD 160 
WD40-rpts                                                                                      

Query      161 SNDEEDVEEETSSSESEQEEKKVRSRRLPARRPQTKSSASKQSQKGRKQRKQESSDEDDDDDDDDEEDTPKRQTRRRAAT 240 
WD40-rpts                                                                                      

Query      241 KVSYKEDQNDFETDSDDLIEMAEGAEEQQDDDSETIEKVVDTRTGKKGATGASTTLYAIEENGDPGADFDPEKEEGETQF 320 
WD40-rpts                                                                                      

Query      321 LIKWKGWSYIHNTWESVDSLTQQKVKGMKKLENFKKKNEELNAWLKKASPEDLEYYNCQQELTNDLSKQFQIIERVIAHK 400 
WD40-rpts                                                                                      

Query      401 SSSGEPEYLCKWMGLPYAECTWEDSALIKKKFQACIDSFHNRNSSKTVPSKDCKVLKQRPRFVPLKKQPSYIGDENLELR 480 
WD40-rpts                                                                                      

Query      481 DYQLDGVNWLAHSWCRCNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFIVVVPLSTLTSWQREFDTWAPDMNVVVYL 560 
WD40-rpts                                                                                      

Query      561 GDVTSRKTIRDYEWINPQTKRIKFNALLTTYEILLKDKGVLGNINWAFLGVDEAHRLKNDDSLLYKTLIDFRSNHRLLIT 640 
WD40-rpts                                                                                      

Query      641 GTPLQNSLKELWSLLHFLMSDKFESWEDFEDEHGKGRDNGYQSLHKVLEPFLLRRVKKDVEKSLPAKVEQILRVDMSAQQ 720 
WD40-rpts                                                                                      

Query      721 KQFYKWILTRNFKALSKGTRGSSSGFLNIVMELKKCCNHAFLIKQPEDGENDAPQEHLQSLVRGGGKLVLLDKLLTRLKD 800 
WD40-rpts                                                                                      

Query      801 RGNRVLIFSQMVRMLDILADYLSMKRYQFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIF 880 
WD40-rpts                              (__________________________WD 1_________________________

Query      881 DSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEDIIERAKKKMVLDHLVIQRMDTTGRTVLDNSSANSNSNPFNK 960 
WD40-rpts      )                                                                               

Query      961 EELSAILKFGAEDLFKEAEGEESEPQEMDIDEILRLAETRESDQGSSATDELLSQFKVANFTMDESTPDLDEKPGRDWDE 1040
WD40-rpts                                                                                      

Query     1041 IIPEEQRRKVEEEQKQKEMEDIYMLPRSRSSNKKAQANDSDSDVGSKLKHRSSGSDSETDDSEDDKRPKRRGRPRARKNN 1120
WD40-rpts                                                                                      

Query     1121 VEGFTDAEIRRFIKAYKKFGAPLERLEAIARDSELVEKSIADLKRLGELVHNSCVTAVQEHEEHLKENPVEAKGPGKRRG 1200
WD40-rpts                                                                                      

Query     1201 INIKISGVQVNAKSIIQHEEEFEPLHKAVPSNPAERNKFQLTCRVKTPHFDVDWDIHDDTQLLLGIYEHGYGNWDLIKTD 1280
WD40-rpts                                                                                      

Query     1281 PDLKLSEKILLDDPEKKPQGKQLQMRTDYLLKMLKKDLESQDAIKAGDEPKIKKRKPRMKKKAPSNELVNEIASPRLSDN 1360
WD40-rpts                                                                                      

Query     1361 PSEEGEVKDDGAEKTPTKKKQKKDNKENKEKTGTPKKEKEGDKDKKRSKPKKEKAKPAGKGKKAQGPVHITQGSEPIPIG 1440
WD40-rpts                                                                                      

Query     1441 EEDDELDQETFSICKERMRPVKKALKQLDKPDEGLSVQDQLQHTRTCLLKIGDRITECLKSYSDPEHIKIWRRNLWIFVS 1520
WD40-rpts                                                                                      

Query     1521 KFTEFGAQKLHRLYKKAQKKRSQEGEKEHKKKDDPIKKKPFRPEPSGSSRDSTGAQPTTKPHPPVSHQSGPPHPPHHREQ 1600
WD40-rpts                                                                                      

Query     1601 YNQHNKRHFPNDDRGDWQRDRKYGYPGNSNQPWQGDRHHPYEPHRYKDHHYSDRRPHGDYRSSGGYRNSGSPRKRPYDQY 1680
WD40-rpts                                                                                      

Query     1681 GNDRDHRGHRDYYD 1694
WD40-rpts                    

1 WD40-repeats found in QUERY=ENSDARP00000080170 (Len=1694):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg 10   825-881      2.80  230.44  0.04774       20.0%     31.35

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  825-881    KRYQFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASAD-TVVIFD

   WD40 Template    TGECLRTLSGHTS------------------GVTSVSFSPDGKRLVSGSEDGTIKVWD