Input parameters:

  Query = ENSDARP00000080162 (Len=1778)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000080162, Len=1778):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MDGRSEDESVSNSSGESSNSDDESGSGSGSGSGSSSSSSSSSSSQSGSSDSGSGSDSGSQSDSDSEKSKEKNDQDNKIDG 80  
WD40-rpts                                                                                      

Query       81 AAFWNSNPSILTVQRTAMLRKQQIQQQQLQQQSSSNTGSDEDSSSSDESDDDSKSRSKGSGSDSDSGSGSGSGSSDSSAE 160 
WD40-rpts                                                                                      

Query      161 EEANSDESVSDYEPSHKVKSRKPSNKANARNGRNNKAPKKKPSHSSSDDEDDYKKALAGPRRQATVNVSYKEDEELKTDS 240 
WD40-rpts                                                                                      

Query      241 DDLVEVCGEDVPPPEEDEFETLERVMEMRIGRKGVTGAVTTVYAVEADGDPNANFDPNRQPGEVQYLIKWKNWSHIHNTW 320 
WD40-rpts                                                                                      

Query      321 ETEETLKQQNVKGMKKLDNFKKKEQEKKKWLKAASPEDVEYFNCQQELMDDLHSQYQLVERIIGHSNQKSAAGYPDYLCK 400 
WD40-rpts                                                                                      

Query      401 WQGLPYSECSWEDGALISKKFQKCIDEYMSRNQCKTIPSRDCKVLKQRPRFVPMKKQPHYIGGEGLELRDYQLDGLNWMA 480 
WD40-rpts                                                                                      

Query      481 HSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTLTSWQREIQLWAPLMNVVVYLGDINSRNMIRT 560 
WD40-rpts                                                                                      

Query      561 HEWMHPQTKRLKLNILLTTYEILLKDKSFLGNVSWAFIGVDEAHRLKNDDSLLYKTMIEFKSNHRLLITGTPLQNSLKEL 640 
WD40-rpts                                                                                      

Query      641 WSLLHFIMPEKFHSWEMFEEEHGKGRDSGYTSLHKELEPFLLRRVKKDVEKSLPAKVEQILRVEMSAVQKQYYKWILTRN 720 
WD40-rpts                                                                                      

Query      721 YKALSKGTKGSTSGFLNIMMELKKCCNHCYLIKPPDDNEFYNRQEGLQHLVRSSGKLILLDKLLVRLKERGHRVLIFSQM 800 
WD40-rpts                                                                                      

Query      801 VRMLDILAEYLKYRQFLFQRLDGSIKGEMRKQALDHFNADGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQ 880 
WD40-rpts                   (__________________________WD 1_________________________)          

Query      881 AQARAHRIGQKKQVNIYRLVTKGSVEEEIIERAKKKMVLDHLVIQRMDTTGKTVLHTGAAPSSSTPFNKEELSAILKFGA 960 
WD40-rpts                                                                                      

Query      961 EELFKEPEGEEQEPQEMDIDEILKRAETRENDPGPSTVGEELLSQFKVANFSMMEDEEIDMDTERNDRNWDDIIPEDHRR 1040
WD40-rpts                                                                                      

Query     1041 RLEEEERQKELAEIYLLPRMRKCAKQQMNFNGNEGRRSRNRRYSASDSDSVSDRKRPKKRGRPRTIPRENIKGFTDAEIR 1120
WD40-rpts                                                                                      

Query     1121 RFIKSYKKFGGPLERLDAIARDAELVDKSEHDLRRLAETVHNGCLRTLKENPCGPERTSGGRRGKVKGPTFRISGVQVNA 1200
WD40-rpts                                                                                      

Query     1201 KLVISHEEELAPLHKAIPADPEERKRYIIPCHSKAAHFDIEWGKEDDSSLLIGIYEYGYGSWEMIKMDPDLNLTHKLLPD 1280
WD40-rpts                                                                                      

Query     1281 DPDKKPQAKQLQTRADYLIKLLSKDLAKKEAQKQAGTAKSRNRKPRGKKNKAVKPKMEDVTNSLSSAPPSDKSSDEEDEK 1360
WD40-rpts                                                                                      

Query     1361 DEEDKETPPPVKLPNRRARVPERTVMEEEDDSDEDELEDAAPVEKDTPEKVVKKEVKKEKKEEGRDSKEREVKEKEIKPE 1440
WD40-rpts                                                                                      

Query     1441 PLQREDDSPAEAVDIKAEKADTPVHTPTGGDAIPLSEESEELDQKTFSVCKERMRPVKAALKQLDRPEKGLSEREQLEHT 1520
WD40-rpts                                                                                      

Query     1521 RQCLIKIGDHITECLREYTNPEQIKQWRKNLWIFVSKFTEFDARKLHKLYKHAIKKRQENAQAAEQNTSTVNTQSFKHAD 1600
WD40-rpts                                                                                      

Query     1601 VERLKESQQDESSRDSYSSDRHHSSRYHEHSKEHHASDSYRKSSDSRKRPYSSFSNGKDHRERERDQYRERGERPDSRYY 1680
WD40-rpts                                                                                      

Query     1681 SESKHRKLDEHRSSREHRSESNSKDRTHSEHRFHSEHRSGSSDYSHHKSSRDYRYHSDWQMEHRSPRDQRSPIGHRSPFE 1760
WD40-rpts                                                                                      

Query     1761 YSSDHKSTPEQVWSGRKT 1778
WD40-rpts                        

1 WD40-repeats found in QUERY=ENSDARP00000080162 (Len=1778):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg 10   814-870      2.84  231.98  0.04557       20.0%     31.18

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  814-870    RQFLFQRLDGSIKGEMRKQALDHFNADGSEDFCFLLSTRAGGLGINLASAD-TVVIFD

   WD40 Template    TGECLRTLSGHTS------------------GVTSVSFSPDGKRLVSGSEDGTIKVWD