Input parameters:

  Query = ENSDARP00000079570 (Len=510)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000079570, Len=510):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MSITSDEVNFLVYRYLQESGFSHSAFTFGIESHISQSNINGTLVPPAALVSVLQKGLQYVEAEISINEDGTVFDGRPIES 80  
WD40-rpts                        (____________WD 1____________)(________________________WD 2___

Query       81 LSLIDAVMPDVVHSRQQAFRDKLSQHQHQGSSSSNSSVAPSLTNSNGETPVNGDQNGTHTHNDDDMEMEVEGEAQIPPSK 160 
WD40-rpts      ____________________)   (_________________WD 3________________)       (_________

Query      161 ATVLRGHESEVFICAWNPVCDLLASGSGDSTARIWNLIENSSTQLVLRHCIREGGQDVPSNKDVTSLDWNSEGTLLATGS 240 
WD40-rpts      ___________WD 4____________________)              (_________________WD 5________

Query      241 YDGFARIWTKDGNLSSTLGQHKGPIFALKWNKKGNSILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNSTFAS 320 
WD40-rpts      ________)  (_________________WD 6________________)   (________________WD 7______

Query      321 CSTDMCIHVCRLGSERPLKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDSCVHDLQAHSKEIYTIKWSPTGI 400 
WD40-rpts      __________)   (_________________WD 8________________)   (_____________________WD

Query      401 GSNNPNANILLASASFDSTVRLWDVDRGVCTHTLTRHQEPVYSVAFSPDGKFLASGSFDKCVHIWDTMSGSLVNSYRGTG 480 
WD40-rpts       9_____________________)   (_________________WD10________________)   (__________

Query      481 GIFEVCWNSVGDKVGASASDGSVCVLDLRK 510 
WD40-rpts      ______WD11________________)   

11 WD40-repeats found in QUERY=ENSDARP00000079570 (Len=510):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1    19-48       3.56  261.72  0.01835        5.0%     17.68
  WD 2:  Seg  4    49-101      5.08  324.67  0.00262       12.5%      8.06
  WD 3:  Seg  6   105-143      7.81  437.14  8.0e-05       22.5%     32.34
  WD 4:  Seg  9   151-196      9.25  496.86  1.3e-05       37.5%     48.97
  WD 5:  Seg 14   211-249      7.91  441.31  7.0e-05       25.0%     39.79
  WD 6:  Seg 17   252-290      9.48  506.13  9.4e-06       25.0%     54.61
  WD 7:  Seg 21   294-331      7.00  403.95  0.00022       22.5%     53.11
  WD 8:  Seg 25   335-373     10.16  534.46  3.9e-06       37.5%     55.32
  WD 9:  Seg 29   377-424      8.28  456.58  4.4e-05       32.5%     55.74
  WD10:  Seg 33   428-466     10.83  561.99  1.7e-06       52.5%     55.43
  WD11:  Seg 37   470-507      7.63  429.86  0.00010       22.5%     56.17

Multiple sequence alignment of 11 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   19-48     -----------------------------SGFSHSAFTFGIESH---------ISQSNINGTLVPPAA
   WD 2   49-101    LVS------VLQKGLQYVEAEISINEDGTVFDGRPIESLSLIDA---------VMPDVVHSRQQAFRD
   WD 3  105-143    -QH------QH-------------QGSSSSNSSVAPSLTNSNGE---------TPVNGDQNGTHTHND
   WD 4  151-196    EGEAQIPPSKA-------------TVLRGHESEVFICAWNPVCD---------LLASGSGDSTARIWN
   WD 5  211-249    -IR------EG-------------GQDVPSNKDVTSLDWNSEGT---------LLATGSYDGFARIWT
   WD 6  252-290    -GN------LS-------------STLGQHKGPIFALKWNKKGN---------SILSAGVDKTTIIWD
   WD 7  294-331    -GE------AK-------------QQFPFHSAPALDVDWQNNS----------TFASCSTDMCIHVCR
   WD 8  335-373    -ER------PL-------------KTFQGHTNEVNAIKWDPSGM---------LLASCSDDMTLKIWS
   WD 9  377-424    -DS------CV-------------HDLQAHSKEIYTIKWSPTGIGSNNPNANILLASASFDSTVRLWD
   WD10  428-466    -GV------CT-------------HTLTRHQEPVYSVAFSPDGK---------FLASGSFDKCVHIWD
   WD11  470-507    -GS------LV-------------NSYRGT-GGIFEVCWNSVGD---------KVGASASDGSVCVLD

   WD40 Template    TGE------CL-------------RTLSGHTSGVTSVSFSPDGK---------RLVSGSEDGTIKVWD