Input parameters:

  Query = ENSDARP00000079567 (Len=511)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000079567, Len=511):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MSISSDEVNFLVYRYLQESGFSHSAFTFGIESHISQSNINGALVPPAALISIIQKGLQYVEAEVSINEDGTLFDGRPIES 80  
WD40-rpts                       (_________________WD 1________________)                        

Query       81 LSLIDAVMPDVVQTRQQVYKDKLAQQQAASASSATTAAAAKNGENTANGEENGAHTLSNHHSDMMEVDRAVEIPASKAMV 160 
WD40-rpts              (_______________________WD 2______________________)               (_____

Query      161 LRGHESEVFICAWNPVSDLLASGSGDSTARIWNLSESSTGGSTQLVLRHCIREGGQDVPSNKDVTSLDWNSEGTLLATGS 240 
WD40-rpts      ____________WD 3________________)                  (________________WD 4________

Query      241 YDGFARIWTKDGNLASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQSNNTFAS 320 
WD40-rpts      ________)  (_________________WD 5________________)   (________________WD 6______

Query      321 CSTDMCIHVCKLGQERPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKLWSMKQDTCVHDLQAHSKEIYTIKWSPTGP 400 
WD40-rpts      __________)   (_________________WD 7________________)   (______________________W

Query      401 GTNNPNANLMLARSASFDSTVRLWDAERGACIHTLTKHQEPVYSVAFSPDGRHLASGSFDKCVHIWNTQSGALVNSYRGT 480 
WD40-rpts      D 8_____________________)   (_________________WD 9________________)   (_________

Query      481 GGIFEVCWNSTGDKVGASASDGSVCVLDLRK 511 
WD40-rpts      _______WD10________________)   

10 WD40-repeats found in QUERY=ENSDARP00000079567 (Len=511):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1    18-56       2.85  232.52  0.04483        5.0%     20.56
  WD 2:  Seg  4    89-139      6.15  368.69  0.00067       17.5%     35.55
  WD 3:  Seg  8   155-193      8.81  478.55  2.2e-05       32.5%     49.90
  WD 4:  Seg 13   212-249      8.28  456.73  4.3e-05       25.0%     39.21
  WD 5:  Seg 16   252-290      9.48  506.43  9.3e-06       25.0%     52.53
  WD 6:  Seg 20   294-331      7.17  410.73  0.00018       22.5%     50.51
  WD 7:  Seg 24   335-373     10.08  530.89  4.3e-06       35.0%     55.73
  WD 8:  Seg 28   377-425      8.06  447.52  5.8e-05       30.0%     55.89
  WD 9:  Seg 32   429-467     10.76  559.26  1.8e-06       47.5%     54.90
  WD10:  Seg 36   471-508      7.69  432.22  9.3e-05       22.5%     56.48

Multiple sequence alignment of 10 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   18-56     --------------------ESGFSHSAFTFGIESH----------ISQSNINGALVPPAALISIIQKG
   WD 2   89-139    PDVVQTRQQVYKDKLAQQQAASASSATTAAAAKNGE----------NTANGEENGAHTLS--------N
   WD 3  155-193    ASKAMVLR------------GHESEVFICAWNPVSD----------LLASGSGDSTARIW--------N
   WD 4  212-249    -REGGQDV------------PSNKDVTSLDWNSEGT----------LLATGSYDGFARIW--------T
   WD 5  252-290    GNLASTLG------------QHKGPIFALKWNKKGN----------FILSAGVDKTTIIW--------D
   WD 6  294-331    GEAKQQFP------------FHSAPALDVDWQSNNT-----------FASCSTDMCIHVC--------K
   WD 7  335-373    ERPIKTFQ------------GHTNEVNAIKWDPTGN----------LLASCSDDMTLKLW--------S
   WD 8  377-425    DTCVHDLQ------------AHSKEIYTIKWSPTGPGTNNPNANLMLARSASFDSTVRLW--------D
   WD 9  429-467    GACIHTLT------------KHQEPVYSVAFSPDGR----------HLASGSFDKCVHIW--------N
   WD10  471-508    GALVNSYR------------GT-GGIFEVCWNSTGD----------KVGASASDGSVCVL--------D

   WD40 Template    GECLRTLS------------GHTSGVTSVSFSPDGK----------RLVSGSEDGTIKVW--------D