Input parameters:

  Query = ENSDARP00000078828 (Len=502)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000078828, Len=502):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MSSLNTRARAVFSAAVEGVHPDMVVRRGLERHGDKLHVGGQSFTLTNNLYLVGFGKAVLGMAAEAERIVGDHLIKGVVSV 80  
WD40-rpts                                                                                      

Query       81 PHGIQNTLRSHGKEKMLLESNSRITVMEGAKHNLPDTDAQKSAECIRDLASSLTEKDLLLVLISGGGSALLPAPAPPMSL 160 
WD40-rpts                                                                                      

Query      161 QEKQDVTRKLAAAGATIQELNTVRRALSLLKGGGLAQCASPAKVVALVLSDVIGDPLDLIASGPTVRSDSSPEEVWAILD 240 
WD40-rpts                                                                                      

Query      241 NYKLSDSLPSSVKEVLSKSMSGQGSRVKNQPQEVKDNVLNVVIGSNTIALECASRKASELGLRPVILSPGVCGDVRSVAR 320 
WD40-rpts                                                                                      

Query      321 LYGLLSSFACSPGKEPPPELAAEILKLGPEVGIESWDLCRTMNVLVGERKEGWGATCLLAGGEPTVKLSGKGRGGRNQEL 400 
WD40-rpts                                                                  (___________________

Query      401 AMRVGLELSQGEVKSGAVFLSGGTDGQDGPTEAAGAVADGELKEEAASQGLDTDSFLANNDSFTFFSKLSEGRRLLNPGL 480 
WD40-rpts      ____WD 1_______________________)                                                

Query      481 TGTNVMDVHVMLLPPSPQKDLQ 502 
WD40-rpts                            

1 WD40-repeats found in QUERY=ENSDARP00000078828 (Len=502):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  9   381-432      3.85  273.74  0.01267       30.0%      9.46

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  381-432    GGEPTVKLSGKGRGGRNQELAMRVGLELSQGEVKSGAVFLSGGTDGQDGPTE

   WD40 Template    TGECLRTLSGHTSGVT------------SVSFSPDGKRLVSGSEDGTIKVWD