Input parameters:

  Query = ENSDARP00000076693 (Len=330)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000076693, Len=330):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MKGALELQHRVSAHPDSRCWYVAWNPAGTTLATCGGDRAIRIWGKEGDSWECKCVLSDGHQRTVRKVAWSPCGKYLASAS 80  
WD40-rpts         (__________________WD 1_________________)(____________________WD 2___________

Query       81 FDATTCIWKKTDEDFECLTVLEGHENEVKCVAWAPSGSLLATCSRDKSVWIWEVDEEDEYECLSVVNSHTQDVKHVVWHP 160 
WD40-rpts      ________)     (_________________WD 3________________)      (_________________WD 

Query      161 TQELLASASYDNKICIYKEEDDDWECRATLEGHESTVWSLTFDPEGRRLASCSDDRTVKIWKESTTGDGSSDESWKCICT 240 
WD40-rpts      4________________)     (_________________WD 5________________)            (_____

Query      241 LSGFHGRTIYDIAWCRLTGALATACGDDGVRVFSEDPTADPEQPIFALSAHVPKAHNQDVNCVSWNPKEAGLLATCSDNG 320 
WD40-rpts      ____________WD 6_________________)            (_________________WD 7____________

Query      321 EFAIWKYNSA 330 
WD40-rpts      _____)    

7 WD40-repeats found in QUERY=ENSDARP00000076693 (Len=330):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     4-44       8.28  456.54  4.4e-05       27.5%     57.38
  WD 2:  Seg  5    45-89       8.72  474.71  2.5e-05       35.0%     53.55
  WD 3:  Seg  9    95-133      9.87  522.47  5.6e-06       35.0%     53.95
  WD 4:  Seg 13   140-178      9.15  492.64  1.4e-05       32.5%     53.10
  WD 5:  Seg 17   184-222     10.68  555.64  2.0e-06       50.0%     52.15
  WD 6:  Seg 21   235-274      7.32  416.92  0.00015       22.5%     57.91
  WD 7:  Seg 24   287-326      7.03  405.02  0.00022       22.5%     45.78

Multiple sequence alignment of 7 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    4-44     ALE-----LQHRVSA-HPDSRCWYVAWNP-AGTTLATCGGDRAIRIWG
   WD 2   45-89     KEGDSWECKCVLSDG-HQ-RTVRKVAWSP-CGKYLASASFDATTCIWK
   WD 3   95-133    -FE-----CLTVLEG-HE-NEVKCVAWAP-SGSLLATCSRDKSVWIWE
   WD 4  140-178    -YE-----CLSVVNS-HT-QDVKHVVWHP-TQELLASASYDNKICIYK
   WD 5  184-222    -WE-----CRATLEG-HE-STVWSLTFDP-EGRRLASCSDDRTVKIWK
   WD 6  235-274    -WK-----CICTLSGFHG-RTIYDIAWCR-LTGALATACGDDGVRVFS
   WD 7  287-326    -AL-----SAHVPKA-HN-QDVNCVSWNPKEAGLLATCSDNGEFAIWK

   WD40 Template    TGE-----CLRTLSG-HT-SGVTSVSFSP-DGKRLVSGSEDGTIKVWD