Input parameters:

  Query = ENSDARP00000075280 (Len=976)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000075280, Len=976):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MDGSTNSLDDVSAESSTEYPDKLSTMEVRLQAQEDEITLLKSSLADALRRLRLHDQQIPLLKQQLIAVNPAAARVLNQSC 80  
WD40-rpts                                                                                      

Query       81 YVDGFSKPCRLSTSSLDGFNHTPNSLISNTAENGEGGAKTIPSHKPSTSERCTQTDPWIPNHEPFPLALTRRVQSLSLED 160 
WD40-rpts                                                                                      

Query      161 ALLEGTPFTDEIQTKEEDADEDEGKKDQTWSSIVEDPIQPTTIRTLQQQHSKSSEDSQGSCPQTPTSSSPAPPKEPTSSP 240 
WD40-rpts                                                                                      

Query      241 HGGPLSPIQEGEKTLARRNSEKWKEPQDKTKQRLSKKAASSTNLLTRSPSLESRAKDLIASAGSQGSRRGTQNQSIKMFI 320 
WD40-rpts                                                                                      

Query      321 RGRPITMYIPSNIQNYEELKMDLPSQKLDLDWVYGYRGRDCRANLYLLPSGEAVYFIACVVVLYHISNQKQRHYRKHTDC 400 
WD40-rpts                                                                         (____________

Query      401 VRCLAIHPDKVRVASGQTAGVDKDGKPLQPFVHIWDSKTLVTLQQIGLGIFERGVGAIAFSNSDGGTFLCVIDDSNEHML 480 
WD40-rpts      _____WD 1________________)          (_____________________WD 2__________________

Query      481 SVWDWNKNIKQAEVKSTNEAVLAVDFSPTDTNNIISCGKSHVYFWTMSAGTMTKKQGIFGKYKKPKFVLCFVFSLTGDVL 560 
WD40-rpts      ___)   (_________________WD 3________________)          (_______________WD 4____

Query      561 TGDSEGNILTWGKSAADIKTLGKGAKETFQIMKQTRAHEGSVFTMCILQGGAILSGGGKDRKIIRWSADLAPERECEIPE 640 
WD40-rpts      ___________)                (_________________WD 5________________)   (_________

Query      641 KFGAVRTIADLDGEELLVGTTRNAILRGTFSDGFVAIVQGHVDEMWGLATHPTQNIFVTCGNDRQLCVWNAEDHRLDWCT 720 
WD40-rpts      ________WD 6________________)(__________________WD 7_________________)  (_______

Query      721 TLEDSGLCADFCPNGAVVSVGLSTARWVVLDLQTKEVVADLIDGNEQLSVMRYSPDGSFLAVGSHDNFIYIYSVTEGGRR 800 
WD40-rpts      __________WD 8________________)   (_________________WD 9________________)(______

Query      801 YTRFGKCTGHSSFITHLDWSKDGKFIMSNSGDYEILYWDVASGCKLLRNRFESKDREWASYTCVLGFHVMGVWLEGSDGT 880 
WD40-rpts      ______________WD10____________________)                          (______________

Query      881 DINALCRSHSERMVAVADDFCKVHLFQYPCPKPKAPSYKYEGHGSHVTNVRFTHNDSHLLSLGGKDTCILQWRMKGAGTA 960 
WD40-rpts      ____WD11__________________)      (_________________WD12_________________)       

Query      961 EPKEHSAAASPPENGT 976 
WD40-rpts                      

12 WD40-repeats found in QUERY=ENSDARP00000075280 (Len=976):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  7   388-426      6.99  403.25  0.00023       27.5%     37.73
  WD 2:  Seg 11   437-484      5.78  353.58  0.00107       22.5%     42.93
  WD 3:  Seg 15   488-526      7.44  422.01  0.00013       15.0%     57.74
  WD 4:  Seg 20   537-572      5.26  331.98  0.00209       20.0%     41.60
  WD 5:  Seg 23   589-627      7.70  432.84  9.1e-05       20.0%     53.75
  WD 6:  Seg 27   631-669      6.43  380.14  0.00047       15.0%     55.54
  WD 7:  Seg 31   670-710      7.80  436.74  8.1e-05       17.5%     55.47
  WD 8:  Seg 35   713-751      6.40  378.99  0.00049       17.5%     55.89
  WD 9:  Seg 39   755-793      8.31  457.90  4.2e-05       27.5%     58.80
  WD10:  Seg 43   794-839      8.37  460.22  3.9e-05       37.5%     50.61
  WD11:  Seg 49   866-907      5.26  331.76  0.00210        2.5%     55.93
  WD12:  Seg 53   914-953      6.65  389.44  0.00035       32.5%     49.96

Multiple sequence alignment of 12 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  388-426    -NQ------KQR----HY--RKHTDCVRCLAIHPDKV----RVAS-GQTAGVDKDGK
   WD 2  437-484    SKT------LVTLQQIGL--GIFERGVGAIAFSNSDGGTFLCVID-DSNEHMLSVWD
   WD 3  488-526    -NI------KQA----EV--KSTNEAVLAVDFSPTDT----NNII-SCGKSHVYFWT
   WD 4  537-572    ---------GIF----GK--YKKPKFVLCFVFSLTGD-----VLT-GDSEGNILTWG
   WD 5  589-627    -FQ------IMK----QT--RAHEGSVFTMCILQGGA----ILSG-GGKDRKIIRWS
   WD 6  631-669    -AP------ERE----CE--IPEKFGAVRTIADLDGE----ELLV-GTTRNAILRGT
   WD 7  670-710    FSD-----GFVA----IV--QGHVDEMWGLATHPTQN----IFVT-CGNDRQLCVWN
   WD 8  713-751    -DH------RLD----WC--TTLEDSGLCADFCPNGA----VVSV-GLSTARWVVLD
   WD 9  755-793    -KE------VVA----DL--IDGNEQLSVMRYSPDGS----FLAV-GSHDNFIYIYS
   WD10  794-839    VTEGGRRYTRFG----KC--TGHSSFITHLDWSKDGK----FIMS-NSGDYEILYWD
   WD11  866-907    GFH------VMG----VWLEGSDGTDINALCRSHSER----MVAV-ADDFCKVHLFQ
   WD12  914-953    -KA------PSY----KY--EGHGSHVTNVRFTHNDS----HLLSLGGKDTCILQWR

   WD40 Template    TGE------CLR----TL--SGHTSGVTSVSFSPDGK----RLVS-GSEDGTIKVWD