Input parameters:

  Query = ENSDARP00000074155 (Len=476)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000074155, Len=476):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MSADVERVLIQLQDEAGEVLGSPFDVPLDISPDKLQLVCNALLQKEEPVPFLFFVKDAELVSSLGSCIQTLGLETEQVLP 80  
WD40-rpts                           (___________________________WD 1__________________________)

Query       81 VVYQPQAVFRVRAVARCTSSLEGHTEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHHTSRGHTHWVLSIAWSPDGK 160 
WD40-rpts                    (_________________WD 2________________)   (_________________WD 3__

Query      161 KLASGCKNSQIFLWDPVTGKQIGKTLTGHTKWITWLCWEPLHLNPECRYLASTSKDCTIRIWDTVLGHYDKILTGHTHSV 240 
WD40-rpts      ______________)     (___________________WD 4__________________)   (_____________

Query      241 TCVKWGGDGLLYTSSQDRTIKVWRAKDGVQCRTLQGHAHWVNTLALSTDYVLRTGAFEPANATINPQDLTGSLEEIKEKA 320 
WD40-rpts      ___WD 5________________)   (_________________WD 6________________)   (__________

Query      321 LKRYNSVRGEGHERLVSGSDDFTMFLWNPAEDKKPVARLTGHQALVNEVLFSPDTRLIASASFDKSIKIWDGKTGKYLNS 400 
WD40-rpts      _______WD 7________________)    (_________________WD 8________________)   (_____

Query      401 LRGHVGPVYQVAWSADSRLLVSGSSDSTLKVWDIKTGKLNADLPGHADEVFAVDWSPDGQRVASGGKDKCLRIWRK 476 
WD40-rpts      ____________WD 9________________)   (_________________WD10________________) 

10 WD40-repeats found in QUERY=ENSDARP00000074155 (Len=476):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  3    22-80       3.73  268.69  0.01481       15.0%     36.60
  WD 2:  Seg  7    95-133     10.25  537.87  3.5e-06       52.5%     48.84
  WD 3:  Seg 11   137-175     10.18  535.10  3.8e-06       42.5%     53.19
  WD 4:  Seg 15   181-223      8.05  447.16  5.9e-05       37.5%     45.31
  WD 5:  Seg 18   227-264      8.89  481.69  2.0e-05       45.0%     54.71
  WD 6:  Seg 22   268-306      7.87  439.59  7.4e-05       25.0%     55.46
  WD 7:  Seg 26   310-348      8.12  450.08  5.3e-05       25.0%     48.96
  WD 8:  Seg 30   353-391      9.63  512.60  7.7e-06       40.0%     55.29
  WD 9:  Seg 34   395-433     10.58  551.69  2.3e-06       50.0%     56.76
  WD10:  Seg 38   437-475      9.86  521.97  5.7e-06       37.5%     49.92

Multiple sequence alignment of 10 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   22-80     SPFDVPLDISPDKLQLVCNALLQKEEPVPF-----LFFVKDAELVSSLGSCIQTLGLETEQVLP
   WD 2   95-133    -ARCTSSLEG-------------HTEAVIS-----VAFSPTGKYLASG------SGDTTVRFWD
   WD 3  137-175    -ETPHHTSRG-------------HTHWVLS-----IAWSPDGKKLASG------CKNSQIFLWD
   WD 4  181-223    --QIGKTLTG-------------HTKWITWLCWEPLHLNPECRYLAST------SKDCTIRIWD
   WD 5  227-264    -GHYDKILTG-------------HTHSVTC-----VKWGGDG-LLYTS------SQDRTIKVWR
   WD 6  268-306    -GVQCRTLQG-------------HAHWVNT-----LALSTDYVLRTGA------FEPANATINP
   WD 7  310-348    -TGSLEEIKE-------------KALKRYN-----SVRGEGHERLVSG------SDDFTMFLWN
   WD 8  353-391    -KKPVARLTG-------------HQALVNE-----VLFSPDTRLIASA------SFDKSIKIWD
   WD 9  395-433    -GKYLNSLRG-------------HVGPVYQ-----VAWSADSRLLVSG------SSDSTLKVWD
   WD10  437-475    -GKLNADLPG-------------HADEVFA-----VDWSPDGQRVASG------GKDKCLRIWR

   WD40 Template    TGECLRTLSG-------------HTSGVTS-----VSFSPDGKRLVSG------SEDGTIKVWD