Input parameters:

  Query = ENSDARP00000073678 (Len=236)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000073678, Len=236):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MKVVTCEIAWHNKEPVYSLDFQQSGDGKTQRLATAGVDTTVRMWRVDKGPDGKAVVEFLSNLARHTKAVNVVRFSPTAEV 80  
WD40-rpts       (___________________WD 1___________________)          (_________________WD 2___

Query       81 LASGGDDAAILLWKLNDNKEPEQTPTFQEEEDAQLNKESWSVVKTLRGHIEDVYDISWTSDGNFMASGSVDNTAIMWDVN 160 
WD40-rpts      _____________)                         (_________________WD 3________________)  

Query      161 KGQKMCIFNDHKSYVQGVAWDPLGQYISTLSCDRVMRVYSAHNSKRTHSKTYFTDSSCFKIPCCFRPSIIHRESQT 236 
WD40-rpts       (_________________WD 4________________)                                    

4 WD40-repeats found in QUERY=ENSDARP00000073678 (Len=236):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     2-45       7.78  435.96  8.3e-05       22.5%     53.18
  WD 2:  Seg  5    56-94       9.48  506.37  9.3e-06       40.0%     48.26
  WD 3:  Seg  9   120-158      8.63  470.95  2.8e-05       37.5%     55.23
  WD 4:  Seg 13   162-200      9.18  493.90  1.4e-05       25.0%     55.91

Multiple sequence alignment of 4 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    2-45     KVVTCEIAWHNKEPVYSLDFQQSGDGKTQRLATAGVDTTVRMWR
   WD 2   56-94     -VEFLSNLARHTKAVNVVRFSPTA----EVLASGGDDAAILLWK
   WD 3  120-158    -WSVVKTLRGHIEDVYDISWTSDG----NFMASGSVDNTAIMWD
   WD 4  162-200    -GQKMCIFNDHKSYVQGVAWDPLG----QYISTLSCDRVMRVYS

   WD40 Template    TGECLRTLSGHTSGVTSVSFSPDG----KRLVSGSEDGTIKVWD