Input parameters:

  Query = ENSDARP00000073472 (Len=322)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000073472, Len=322):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MASSYYQEMQEVFRNNNKSREFPAHSAKVHSVAWSCDGKRLASGSFDKTASVFVLEKDRLVKENNYRGHGDSVDQLCWHP 80  
WD40-rpts                    (_________________WD 1_________________)(____________________WD 2_

Query       81 TNPDLFVTASGDKTIRIWDVRTTKCMATVSTKGENINICWSPDGQTIAVGNKDDVVTFIDAKTHRPRAEEQFKFEVNEIS 160 
WD40-rpts      __________________)   (________________WD 3________________)  (_________________

Query      161 WNNDNDMFFLTNGNGCINILSYPELKLIQSINAHPSNCICIKFDPTGKYFATGSADALVSLWNVEELVCVRCFSRLDWPV 240 
WD40-rpts      WD 4________________)   (_________________WD 5________________)   (_____________

Query      241 RTLSFSHDGKMLASASEDHFIDIAEVETGEKLWEIQCESPTFTVAWHPKRPLLAYACDDKEGKYDSNREAGTVKLFGLPN 320 
WD40-rpts      ____WD 6________________)   (________________WD 7________________)              

Query      321 DS 322 
WD40-rpts        

7 WD40-repeats found in QUERY=ENSDARP00000073472 (Len=322):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  3    15-54      11.30  581.51  9.0e-07       42.5%     53.79
  WD 2:  Seg  7    55-99       7.53  425.72  0.00011       27.5%     55.29
  WD 3:  Seg 11   103-140      8.19  453.11  4.9e-05       25.0%     55.97
  WD 4:  Seg 15   143-181      7.94  442.68  6.7e-05       15.0%     52.64
  WD 5:  Seg 19   185-223      9.79  519.08  6.3e-06       25.0%     56.55
  WD 6:  Seg 23   227-265      9.68  514.50  7.2e-06       40.0%     57.17
  WD 7:  Seg 27   269-306      7.07  406.66  0.00021       22.5%     57.13

Multiple sequence alignment of 7 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   15-54     NNN----KSREFPAHSAKVHSVAWSC-DGKRLASGSFDKTASVFV
   WD 2   55-99     LEKDRLVKENNYRGHGDSVDQLCWHPTNPDLFVTASGDKTIRIWD
   WD 3  103-140    -TK----CMATVSTKGENI-NICWSP-DGQTIAVGNKDDVVTFID
   WD 4  143-181    -TH----RPRAEEQFKFEVNEISWNN-DNDMFFLTNGNGCINILS
   WD 5  185-223    -LK----LIQSINAHPSNCICIKFDP-TGKYFATGSADALVSLWN
   WD 6  227-265    -LV----CVRCFSRLDWPVRTLSFSH-DGKMLASASEDHFIDIAE
   WD 7  269-306    -GE----KLWEIQCE-SPTFTVAWHP-KRPLLAYACDDKEGKYDS

   WD40 Template    TGE----CLRTLSGHTSGVTSVSFSP-DGKRLVSGSEDGTIKVWD